Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MIR4782-201ENST00000577987 79 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 MIR4529-201ENST00000578110 78 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 AC025811.1-201ENST00000604312 472 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 AC021755.4-201ENST00000616620 456 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 Z75746.1-201ENST00000440243 2080 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 AL356292.1-201ENST00000283110 373 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 OR56A5-201ENST00000340110 738 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 SNORD113-6-201ENST00000363345 75 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 RNU5E-6P-201ENST00000365574 115 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 ELOCP17-201ENST00000414751 326 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 RPS24P7-201ENST00000416921 246 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 HSFY7P-201ENST00000432672 318 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 HSFY8P-201ENST00000437934 318 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 HSFY5P-201ENST00000453726 309 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 MTND2P39-201ENST00000457230 764 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 MTCO1P42-201ENST00000457379 726 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 RNU6-953P-201ENST00000459154 107 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 AC023194.1-201ENST00000493084 308 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 RPL22P13-201ENST00000493291 347 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 AC107393.1-201ENST00000512403 346 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 RNU5B-3P-201ENST00000516601 115 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 RNU6-572P-201ENST00000516724 80 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 AC123904.2-201ENST00000548059 300 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 RNU6-91P-201ENST00000607774 107 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 AC034229.4-201ENST00000607861 441 ntBASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
ECHDC3Q96DC8 HSPE1P11-201ENST00000339579 310 ntBASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 RNU6-288P-201ENST00000363690 104 ntBASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 SNORA4.3-201ENST00000365564 137 ntBASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 FCF1P10-201ENST00000407590 479 ntBASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 RNU2-20P-201ENST00000410425 191 ntBASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 RNU2-62P-201ENST00000410868 191 ntBASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 EIF1AXP1-201ENST00000419267 435 ntBASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 AL022400.1-201ENST00000423946 935 ntBASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 MTND4P25-201ENST00000441039 533 ntBASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 RPL36AP48-201ENST00000485521 314 ntBASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 AC011005.2-201ENST00000487324 359 ntBASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 RNU6-143P-201ENST00000516942 93 ntBASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 MTCO2P2-201ENST00000591258 225 ntBASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 AC174048.1-201ENST00000603389 144 ntBASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 AP000860.1-201ENST00000605250 559 ntBASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 MIR6845-201ENST00000613182 61 ntBASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 AC241585.2-209ENST00000638217 143 ntBASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
ECHDC3Q96DC8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 RNU6-960P-201ENST00000364056 120 ntBASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 RNU6-1280P-201ENST00000365211 107 ntBASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 RNU6-898P-201ENST00000365627 104 ntBASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 RNU6-166P-201ENST00000384371 107 ntBASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 MIR513B-201ENST00000385136 84 ntBASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 MIR301A-201ENST00000385261 86 ntBASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 AIMP1P2-201ENST00000425294 312 ntBASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 CR769776.1-201ENST00000441254 787 ntBASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 AC007677.1-201ENST00000445757 515 ntBASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 AL606662.1-201ENST00000445763 553 ntBASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 RPS3AP22-201ENST00000488297 769 ntBASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 AC109927.2-201ENST00000506416 303 ntBASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 RNU6-914P-201ENST00000516749 109 ntBASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 RNU6-678P-201ENST00000516832 109 ntBASIC1.87□□□□□ -2.11
ECHDC3Q96DC8 RNU6-1092P-201ENST00000516955 87 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms