Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AL137843.1-201ENST00000605078 385 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 DISC2.1-201ENST00000612827 205 ntBASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SH3KBP1Q96B97 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 RNU6-451P-201ENST00000362921 107 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 RNY3P3-201ENST00000363816 102 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 RNU6-1303P-201ENST00000364841 107 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 RNU6-1180P-201ENST00000364935 107 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 RNU6-45P-201ENST00000384471 107 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 RNU6-393P-201ENST00000384475 107 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 MIR128-1-201ENST00000384921 82 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 SNORA48.2-201ENST00000390926 124 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 RPL21P75-201ENST00000396599 483 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 RPL21P28-201ENST00000401418 483 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 AL592114.1-201ENST00000403842 483 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 AL357075.1-201ENST00000404107 726 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 NDUFS5P4-201ENST00000412983 318 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 RPL26P27-201ENST00000414397 437 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 AC245291.1-201ENST00000419501 328 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 MRPS10P2-201ENST00000431226 381 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 AL590639.1-201ENST00000456484 337 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 RPL21P39-201ENST00000463605 483 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 MTCO3P38-201ENST00000468910 766 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 RPL21P93-201ENST00000480465 489 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 AC087190.1-201ENST00000484462 480 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 AC093591.1-201ENST00000491435 481 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 RPL21P16-201ENST00000495531 483 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 CCDC34P1-201ENST00000507441 517 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 AC114786.4-201ENST00000508771 728 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 PSMA2P1-201ENST00000526365 646 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 NACAP3-201ENST00000552100 481 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 AC005476.1-201ENST00000554427 397 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 AC007938.3-201ENST00000604965 623 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 RMST_3.1-201ENST00000611651 109 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 U6.42-201ENST00000618440 107 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 AC005858.4-201ENST00000623191 700 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 AP003400.5-201ENST00000624827 617 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 OR4G1P-203ENST00000641984 1631 ntBASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SH3KBP1Q96B97 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 RNA5SP383-201ENST00000362934 120 ntBASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 RNU6-778P-201ENST00000363269 103 ntBASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 U8.9-201ENST00000365667 134 ntBASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 RNU6-38P-201ENST00000384085 107 ntBASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 SNORA16.2-201ENST00000390991 127 ntBASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 AL669831.1-202ENST00000428504 417 ntBASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 HMGB1P9-201ENST00000429856 646 ntBASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 GTF2IP13-201ENST00000438487 386 ntBASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 RNU6-333P-201ENST00000459117 107 ntBASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 RPS29P2-201ENST00000479278 136 ntBASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 RPS27AP10-201ENST00000496103 208 ntBASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 AC113155.1-201ENST00000511141 769 ntBASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 AL118558.2-201ENST00000556294 238 ntBASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 UCA1.1-201ENST00000620952 75 ntBASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 U2.21-201ENST00000637295 81 ntBASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.18□□□□□ -1.9
SH3KBP1Q96B97 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 MIR148B-201ENST00000362252 99 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 Y_RNA.378-201ENST00000365652 113 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 SNORA26.7-201ENST00000391288 122 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 PGBD4P6-201ENST00000421501 610 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 AC098614.2-201ENST00000426040 255 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 Z75741.1-201ENST00000446793 314 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 MTATP6P7-201ENST00000453315 681 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 snoU109.2-201ENST00000459316 135 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 AC128713.1-201ENST00000471495 306 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 RN7SL283P-201ENST00000489055 303 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms