Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC107905.1-201ENST00000616204 426 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 AC091932.3-201ENST00000624223 323 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
TTC28Q96AY4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
TTC28Q96AY4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
TTC28Q96AY4 AL139098.1-201ENST00000407291 389 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.64□□□□□ -2.31
TTC28Q96AY4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.64□□□□□ -2.31
TTC28Q96AY4 AL050341.1-201ENST00000447743 313 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.64□□□□□ -2.31
TTC28Q96AY4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.64□□□□□ -2.31
TTC28Q96AY4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.64□□□□□ -2.31
TTC28Q96AY4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.64□□□□□ -2.31
TTC28Q96AY4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.64□□□□□ -2.31
TTC28Q96AY4 MIR4765-201ENST00000585007 77 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.64□□□□□ -2.31
TTC28Q96AY4 AC068057.2-201ENST00000624047 895 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 AP003400.5-201ENST00000624827 617 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.64□□□□□ -2.31
TTC28Q96AY4 AP003399.1-201ENST00000637534 361 ntBASIC0.64□□□□□ -2.31
TTC28Q96AY4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.64□□□□□ -2.31
TTC28Q96AY4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
TTC28Q96AY4 MIR365A-201ENST00000362260 87 ntBASIC0.63□□□□□ -2.31
TTC28Q96AY4 Y_RNA.28-201ENST00000362554 111 ntBASIC0.63□□□□□ -2.31
TTC28Q96AY4 MIR147B-201ENST00000390185 80 ntBASIC0.63□□□□□ -2.31
TTC28Q96AY4 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.63□□□□□ -2.31
TTC28Q96AY4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.63□□□□□ -2.31
TTC28Q96AY4 MTND4LP10-201ENST00000435146 291 ntBASIC0.63□□□□□ -2.31
TTC28Q96AY4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.63□□□□□ -2.31
TTC28Q96AY4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.63□□□□□ -2.31
TTC28Q96AY4 AC005410.1-202ENST00000460347 485 ntBASIC0.63□□□□□ -2.31
TTC28Q96AY4 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.63□□□□□ -2.31
TTC28Q96AY4 RNA5SP227-201ENST00000516184 113 ntBASIC0.63□□□□□ -2.31
TTC28Q96AY4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.63□□□□□ -2.31
TTC28Q96AY4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.63□□□□□ -2.31
TTC28Q96AY4 HMGN2P15-201ENST00000585707 270 ntBASIC0.63□□□□□ -2.31
TTC28Q96AY4 AL355877.2-201ENST00000603670 358 ntBASIC0.63□□□□□ -2.31
TTC28Q96AY4 SDR42E1P2-201ENST00000614861 481 ntBASIC0.63□□□□□ -2.31
TTC28Q96AY4 SDR42E1P4-201ENST00000620894 481 ntBASIC0.63□□□□□ -2.31
TTC28Q96AY4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
TTC28Q96AY4 SNORD95.1-201ENST00000364099 68 ntBASIC0.63□□□□□ -2.31
TTC28Q96AY4 U3.13-201ENST00000364804 214 ntBASIC0.63□□□□□ -2.31
TTC28Q96AY4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.63□□□□□ -2.31
TTC28Q96AY4 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.63□□□□□ -2.31
TTC28Q96AY4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.63□□□□□ -2.31
TTC28Q96AY4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.63□□□□□ -2.31
TTC28Q96AY4 AL020997.3-201ENST00000602843 359 ntBASIC0.63□□□□□ -2.31
TTC28Q96AY4 AC096586.1-201ENST00000610267 561 ntBASIC0.63□□□□□ -2.31
TTC28Q96AY4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
TTC28Q96AY4 MTND5P30-201ENST00000452896 1731 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 U8.3-201ENST00000363321 132 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 RNU4-42P-201ENST00000364738 142 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
TTC28Q96AY4 CISD1P1-201ENST00000393907 327 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 AL356432.1-201ENST00000405809 419 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.62□□□□□ -2.31
TTC28Q96AY4 BPY2DP-201ENST00000422208 265 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.62□□□□□ -2.31
TTC28Q96AY4 ZNF705CP-201ENST00000530515 889 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.62□□□□□ -2.31
TTC28Q96AY4 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 AL031176.1-201ENST00000604554 466 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.62□□□□□ -2.31
TTC28Q96AY4 AL627230.6-201ENST00000611129 280 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 AL592148.2-201ENST00000612210 372 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 AL589743.7-201ENST00000612637 233 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 AP002791.1-201ENST00000623291 381 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 AC073592.7-201ENST00000623659 507 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 LINC02211-204ENST00000642024 1070 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.62□□□□□ -2.31
TTC28Q96AY4 MIR126-201ENST00000362291 85 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 RNU6-19P-201ENST00000384718 107 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 RN7SKP61-201ENST00000410642 295 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 RNU2-41P-201ENST00000410991 178 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 RNA5SP450-201ENST00000411206 102 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.62□□□□□ -2.31
TTC28Q96AY4 EIF4EP4-201ENST00000424916 578 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.62□□□□□ -2.31
TTC28Q96AY4 FGF7P5-201ENST00000441829 291 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.62□□□□□ -2.31
TTC28Q96AY4 RPL23AP3-201ENST00000453844 468 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.62□□□□□ -2.31
TTC28Q96AY4 AC020699.1-201ENST00000505161 445 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.62□□□□□ -2.31
TTC28Q96AY4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.62□□□□□ -2.31
TTC28Q96AY4 RNU6-496P-201ENST00000516145 99 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 RNU7-193P-201ENST00000516723 65 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 AC090142.3-201ENST00000519012 385 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 HSPA8P13-201ENST00000523715 472 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.62□□□□□ -2.31
TTC28Q96AY4 AL096840.1-201ENST00000603287 93 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 AC087045.1-201ENST00000605856 382 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 AC008498.1-201ENST00000613012 531 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 AC090617.9-201ENST00000623751 147 ntBASIC0.62□□□□□ -2.31
TTC28Q96AY4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
TTC28Q96AY4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
TTC28Q96AY4 GDI2P1-201ENST00000429312 1336 ntBASIC0.61□□□□□ -2.31
TTC28Q96AY4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.61□□□□□ -2.31
TTC28Q96AY4 AC007785.2-201ENST00000598627 1916 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms