Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 MIR486-1-201ENST00000612171 68 ntBASIC3.8□□□□□ -1.8
USP7Q93009 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.8□□□□□ -1.8
USP7Q93009 U4.7-201ENST00000638126 106 ntBASIC3.8□□□□□ -1.8
USP7Q93009 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
USP7Q93009 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP7Q93009 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
USP7Q93009 KPNA2P1-201ENST00000458289 1591 ntBASIC3.8□□□□□ -1.8
USP7Q93009 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.8□□□□□ -1.8
USP7Q93009 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP7Q93009 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP7Q93009 CDC27P3-201ENST00000635418 1910 ntBASIC3.8□□□□□ -1.8
USP7Q93009 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP7Q93009 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP7Q93009 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP7Q93009 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
USP7Q93009 RNA5SP119-201ENST00000362715 117 ntBASIC3.79□□□□□ -1.8
USP7Q93009 RNA5SP322-201ENST00000363617 119 ntBASIC3.79□□□□□ -1.8
USP7Q93009 RNA5SP97-201ENST00000365006 84 ntBASIC3.79□□□□□ -1.8
USP7Q93009 Y_RNA.315-201ENST00000365117 102 ntBASIC3.79□□□□□ -1.8
USP7Q93009 RNU1-100P-201ENST00000365255 165 ntBASIC3.79□□□□□ -1.8
USP7Q93009 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.79□□□□□ -1.8
USP7Q93009 Y_RNA.473-201ENST00000384333 102 ntBASIC3.79□□□□□ -1.8
USP7Q93009 RNU1-89P-201ENST00000384592 164 ntBASIC3.79□□□□□ -1.8
USP7Q93009 AL138878.1-201ENST00000405131 347 ntBASIC3.79□□□□□ -1.8
USP7Q93009 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.79□□□□□ -1.8
USP7Q93009 AC097713.2-201ENST00000430199 356 ntBASIC3.79□□□□□ -1.8
USP7Q93009 RPS15AP10-201ENST00000432472 382 ntBASIC3.79□□□□□ -1.8
USP7Q93009 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.79□□□□□ -1.8
USP7Q93009 PCMTD1P1-201ENST00000455560 355 ntBASIC3.79□□□□□ -1.8
USP7Q93009 RPL23AP62-201ENST00000463396 453 ntBASIC3.79□□□□□ -1.8
USP7Q93009 RPL23AP14-201ENST00000468281 468 ntBASIC3.79□□□□□ -1.8
USP7Q93009 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
USP7Q93009 BTF3L4P4-201ENST00000506381 449 ntBASIC3.79□□□□□ -1.8
USP7Q93009 RNU6-377P-201ENST00000515965 102 ntBASIC3.79□□□□□ -1.8
USP7Q93009 SNORA70.14-201ENST00000516205 110 ntBASIC3.79□□□□□ -1.8
USP7Q93009 RNU1-95P-201ENST00000516357 160 ntBASIC3.79□□□□□ -1.8
USP7Q93009 RNU1-128P-201ENST00000516704 160 ntBASIC3.79□□□□□ -1.8
USP7Q93009 RNU6-1213P-201ENST00000517075 94 ntBASIC3.79□□□□□ -1.8
USP7Q93009 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP7Q93009 AC021739.1-201ENST00000559631 174 ntBASIC3.79□□□□□ -1.8
USP7Q93009 MIR4474-201ENST00000579189 78 ntBASIC3.79□□□□□ -1.8
USP7Q93009 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.79□□□□□ -1.8
USP7Q93009 AC009314.1-201ENST00000603871 304 ntBASIC3.79□□□□□ -1.8
USP7Q93009 AL353621.2-201ENST00000605340 133 ntBASIC3.79□□□□□ -1.8
USP7Q93009 AP000654.2-201ENST00000605633 586 ntBASIC3.79□□□□□ -1.8
USP7Q93009 AL034408.1-202ENST00000636088 415 ntBASIC3.79□□□□□ -1.8
USP7Q93009 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP7Q93009 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.79□□□□□ -1.8
USP7Q93009 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP7Q93009 AC010680.1-201ENST00000590024 3590 ntBASIC3.79□□□□□ -1.8
USP7Q93009 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP7Q93009 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP7Q93009 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP7Q93009 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP7Q93009 ADAM3A-203ENST00000461344 2157 ntBASIC3.78□□□□□ -1.8
USP7Q93009 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.78□□□□□ -1.8
USP7Q93009 RNU6-428P-201ENST00000362942 107 ntBASIC3.78□□□□□ -1.8
USP7Q93009 RNU6-942P-201ENST00000363002 107 ntBASIC3.78□□□□□ -1.8
USP7Q93009 SNORD6-201ENST00000365444 73 ntBASIC3.78□□□□□ -1.8
USP7Q93009 RNU6-43P-201ENST00000384302 107 ntBASIC3.78□□□□□ -1.8
USP7Q93009 Y_RNA.579-201ENST00000390939 94 ntBASIC3.78□□□□□ -1.8
USP7Q93009 SNORA3.3-201ENST00000408712 125 ntBASIC3.78□□□□□ -1.8
USP7Q93009 Y_RNA.594-201ENST00000410373 140 ntBASIC3.78□□□□□ -1.8
USP7Q93009 RNU6-1050P-201ENST00000410388 107 ntBASIC3.78□□□□□ -1.8
USP7Q93009 Z99755.1-201ENST00000414048 380 ntBASIC3.78□□□□□ -1.8
USP7Q93009 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.78□□□□□ -1.8
USP7Q93009 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.78□□□□□ -1.8
USP7Q93009 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.78□□□□□ -1.8
USP7Q93009 USP9YP30-201ENST00000430729 455 ntBASIC3.78□□□□□ -1.8
USP7Q93009 AC091286.1-201ENST00000431233 461 ntBASIC3.78□□□□□ -1.8
USP7Q93009 SNORD5.1-201ENST00000458800 75 ntBASIC3.78□□□□□ -1.8
USP7Q93009 RNU7-152P-201ENST00000458982 64 ntBASIC3.78□□□□□ -1.8
USP7Q93009 Y_RNA.653-201ENST00000459091 95 ntBASIC3.78□□□□□ -1.8
USP7Q93009 AK3P2-201ENST00000507976 429 ntBASIC3.78□□□□□ -1.8
USP7Q93009 Y_RNA.670-201ENST00000516255 105 ntBASIC3.78□□□□□ -1.8
USP7Q93009 SNORA43.2-201ENST00000516652 128 ntBASIC3.78□□□□□ -1.8
USP7Q93009 Y_RNA.708-201ENST00000516950 96 ntBASIC3.78□□□□□ -1.8
USP7Q93009 AC020895.1-201ENST00000595362 272 ntBASIC3.78□□□□□ -1.8
USP7Q93009 AC011890.2-201ENST00000613393 294 ntBASIC3.78□□□□□ -1.8
USP7Q93009 AC012314.7-201ENST00000619693 93 ntBASIC3.78□□□□□ -1.8
USP7Q93009 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.78□□□□□ -1.8
USP7Q93009 AL669831.3-213ENST00000636676 183 ntBASIC3.78□□□□□ -1.8
USP7Q93009 AC009093.8-201ENST00000641769 292 ntBASIC3.78□□□□□ -1.8
USP7Q93009 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP7Q93009 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP7Q93009 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP7Q93009 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.78□□□□□ -1.8
USP7Q93009 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
USP7Q93009 MTND4P23-201ENST00000447723 1363 ntBASIC3.77□□□□□ -1.81
USP7Q93009 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.77□□□□□ -1.81
USP7Q93009 MAPK10-372ENST00000641954 3413 ntBASIC3.77□□□□□ -1.81
USP7Q93009 U8.11-201ENST00000384699 133 ntBASIC3.77□□□□□ -1.81
USP7Q93009 U8.12-201ENST00000384701 133 ntBASIC3.77□□□□□ -1.81
USP7Q93009 RNU6-328P-201ENST00000390887 106 ntBASIC3.77□□□□□ -1.81
USP7Q93009 SNORA75.4-201ENST00000391278 119 ntBASIC3.77□□□□□ -1.81
USP7Q93009 HMGN2P8-201ENST00000391458 268 ntBASIC3.77□□□□□ -1.81
USP7Q93009 AL354751.2-201ENST00000415471 210 ntBASIC3.77□□□□□ -1.81
USP7Q93009 SYF2P2-201ENST00000417620 583 ntBASIC3.77□□□□□ -1.81
USP7Q93009 RPL23AP83-201ENST00000434984 473 ntBASIC3.77□□□□□ -1.81
USP7Q93009 AC125238.1-201ENST00000448842 249 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms