Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.81□□□□□ -1.64
HPS1Q92902 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.81□□□□□ -1.64
HPS1Q92902 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HPS1Q92902 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HPS1Q92902 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HPS1Q92902 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HPS1Q92902 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HPS1Q92902 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HPS1Q92902 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HPS1Q92902 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HPS1Q92902 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HPS1Q92902 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HPS1Q92902 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HPS1Q92902 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HPS1Q92902 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
HPS1Q92902 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HPS1Q92902 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HPS1Q92902 OR51H2P-202ENST00000641424 3046 ntBASIC4.8□□□□□ -1.64
HPS1Q92902 SNORA51.8-201ENST00000384234 132 ntBASIC4.8□□□□□ -1.64
HPS1Q92902 RNU6-106P-201ENST00000384405 107 ntBASIC4.8□□□□□ -1.64
HPS1Q92902 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HPS1Q92902 YPEL5P1-201ENST00000419731 367 ntBASIC4.8□□□□□ -1.64
HPS1Q92902 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.8□□□□□ -1.64
HPS1Q92902 AC006028.1-201ENST00000438379 402 ntBASIC4.8□□□□□ -1.64
HPS1Q92902 RN7SL447P-201ENST00000494711 245 ntBASIC4.8□□□□□ -1.64
HPS1Q92902 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.8□□□□□ -1.64
HPS1Q92902 AC091912.1-201ENST00000511351 248 ntBASIC4.8□□□□□ -1.64
HPS1Q92902 RNA5SP34-201ENST00000516887 130 ntBASIC4.8□□□□□ -1.64
HPS1Q92902 MIR4311-201ENST00000580794 100 ntBASIC4.8□□□□□ -1.64
HPS1Q92902 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.8□□□□□ -1.64
HPS1Q92902 AC015726.2-201ENST00000620112 122 ntBASIC4.8□□□□□ -1.64
HPS1Q92902 MIR6837-201ENST00000620884 64 ntBASIC4.8□□□□□ -1.64
HPS1Q92902 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.8□□□□□ -1.64
HPS1Q92902 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HPS1Q92902 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
HPS1Q92902 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HPS1Q92902 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HPS1Q92902 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HPS1Q92902 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
HPS1Q92902 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.79□□□□□ -1.64
HPS1Q92902 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HPS1Q92902 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.79□□□□□ -1.64
HPS1Q92902 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.79□□□□□ -1.64
HPS1Q92902 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HPS1Q92902 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HPS1Q92902 PHKBP1-201ENST00000450951 1951 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 SNORD114-19-201ENST00000363072 75 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 Y_RNA.114-201ENST00000363265 113 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 RNA5SP30-201ENST00000365552 115 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 SNORD72-201ENST00000390994 80 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.79□□□□□ -1.64
HPS1Q92902 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.79□□□□□ -1.64
HPS1Q92902 AL590399.6-201ENST00000446396 307 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 PPIAP21-201ENST00000464473 501 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 AC091179.3-201ENST00000474761 144 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 RN7SL583P-201ENST00000475692 287 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 AC016632.1-201ENST00000503994 196 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.79□□□□□ -1.64
HPS1Q92902 RNA5SP360-201ENST00000516555 118 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 RN7SKP234-201ENST00000517173 224 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.79□□□□□ -1.64
HPS1Q92902 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HPS1Q92902 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.79□□□□□ -1.64
HPS1Q92902 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.79□□□□□ -1.64
HPS1Q92902 AC211433.2-201ENST00000608433 387 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 U73479.1-201ENST00000618062 168 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 AC025521.1-201ENST00000621624 286 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HPS1Q92902 AL136164.4-201ENST00000625013 2135 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 AC138915.1-201ENST00000565427 1685 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HPS1Q92902 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HPS1Q92902 AL596211.1-201ENST00000569873 2277 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 AC100757.1-201ENST00000616872 1835 ntBASIC4.79□□□□□ -1.64
HPS1Q92902 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HPS1Q92902 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HPS1Q92902 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.78□□□□□ -1.64
HPS1Q92902 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HPS1Q92902 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.78□□□□□ -1.64
HPS1Q92902 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
HPS1Q92902 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HPS1Q92902 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HPS1Q92902 Y_RNA.120-201ENST00000363304 110 ntBASIC4.78□□□□□ -1.64
HPS1Q92902 RPL21P17-201ENST00000397467 475 ntBASIC4.78□□□□□ -1.64
HPS1Q92902 MIR1286-201ENST00000408112 78 ntBASIC4.78□□□□□ -1.64
HPS1Q92902 RNU6-710P-201ENST00000410424 105 ntBASIC4.78□□□□□ -1.64
HPS1Q92902 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.78□□□□□ -1.64
HPS1Q92902 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.78□□□□□ -1.64
HPS1Q92902 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.78□□□□□ -1.64
HPS1Q92902 snoU13.6-201ENST00000458785 104 ntBASIC4.78□□□□□ -1.64
HPS1Q92902 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HPS1Q92902 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
HPS1Q92902 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HPS1Q92902 MAPK10-320ENST00000641462 6696 ntBASIC4.78□□□□□ -1.64
HPS1Q92902 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HPS1Q92902 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.78□□□□□ -1.64
HPS1Q92902 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.78□□□□□ -1.64
HPS1Q92902 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HPS1Q92902 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms