Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 RNA5SP139-201ENST00000364340 117 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 RNU4-76P-201ENST00000364509 141 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 RNA5SP97-201ENST00000365006 84 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
NPIPB3Q92617 AL513475.1-201ENST00000406602 315 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 RNU6-1245P-201ENST00000411130 106 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 SAR1AP4-201ENST00000429225 591 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 AL133396.1-201ENST00000432048 687 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3□□□□□ -1.93
NPIPB3Q92617 NOTCH2P1-201ENST00000443481 624 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3□□□□□ -1.93
NPIPB3Q92617 AL441985.1-201ENST00000457727 251 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3□□□□□ -1.93
NPIPB3Q92617 AC107626.1-201ENST00000471084 183 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 RPS23P1-201ENST00000491662 432 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 AKIRIN2P1-201ENST00000505898 352 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 AC002456.2-201ENST00000509356 380 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3□□□□□ -1.93
NPIPB3Q92617 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 SNORA31.9-201ENST00000516429 84 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 Y_RNA.718-201ENST00000517110 102 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3□□□□□ -1.93
NPIPB3Q92617 DNAJC8P1-201ENST00000554535 372 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3□□□□□ -1.93
NPIPB3Q92617 AC010653.1-201ENST00000571108 881 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3□□□□□ -1.93
NPIPB3Q92617 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3□□□□□ -1.93
NPIPB3Q92617 AL355877.2-201ENST00000603670 358 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 AC008745.1-201ENST00000604064 271 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 AL133255.1-201ENST00000606374 441 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 RNU4-89P-201ENST00000607443 133 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 AC135507.2-201ENST00000612443 309 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 AL160413.1-201ENST00000622780 310 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3□□□□□ -1.93
NPIPB3Q92617 OFD1P6Y-202ENST00000451061 2724 ntBASIC3□□□□□ -1.93
NPIPB3Q92617 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NPIPB3Q92617 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3□□□□□ -1.93
NPIPB3Q92617 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3□□□□□ -1.93
NPIPB3Q92617 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
NPIPB3Q92617 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPIPB3Q92617 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.99□□□□□ -1.93
NPIPB3Q92617 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NPIPB3Q92617 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
NPIPB3Q92617 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPIPB3Q92617 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPIPB3Q92617 CEP170P1-201ENST00000502249 4587 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.99□□□□□ -1.93
NPIPB3Q92617 Y_RNA.813-201ENST00000364639 102 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 SNORD116-29-201ENST00000384516 83 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 RNU6-748P-201ENST00000384648 107 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 MIR199A2-201ENST00000385289 110 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 Y_RNA.594-201ENST00000410373 140 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 RNU6-1050P-201ENST00000410388 107 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 AC074117.2-201ENST00000417130 397 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.99□□□□□ -1.93
NPIPB3Q92617 USP9YP30-201ENST00000430729 455 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.99□□□□□ -1.93
NPIPB3Q92617 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC2.99□□□□□ -1.93
NPIPB3Q92617 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.99□□□□□ -1.93
NPIPB3Q92617 AL136097.1-201ENST00000456945 913 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 Y_RNA.653-201ENST00000459091 95 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.99□□□□□ -1.93
NPIPB3Q92617 ACA59.1-201ENST00000515966 143 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 RNA5SP208-201ENST00000516156 78 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 RNU6-612P-201ENST00000516909 102 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 SNORA31.18-201ENST00000517043 134 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.99□□□□□ -1.93
NPIPB3Q92617 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.99□□□□□ -1.93
NPIPB3Q92617 AP000654.2-201ENST00000605633 586 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.99□□□□□ -1.93
NPIPB3Q92617 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.99□□□□□ -1.93
NPIPB3Q92617 U7.8-201ENST00000619968 63 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 AC024581.2-201ENST00000619986 252 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 AC090617.7-201ENST00000623952 126 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 AL669831.3-213ENST00000636676 183 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NPIPB3Q92617 AC091564.4-201ENST00000533934 2194 ntBASIC2.99□□□□□ -1.93
NPIPB3Q92617 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPIPB3Q92617 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPIPB3Q92617 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.99□□□□□ -1.93
NPIPB3Q92617 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPIPB3Q92617 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NPIPB3Q92617 RNU6-487P-201ENST00000365430 104 ntBASIC2.98□□□□□ -1.93
NPIPB3Q92617 RNU6-843P-201ENST00000384454 104 ntBASIC2.98□□□□□ -1.93
NPIPB3Q92617 SNORA75.4-201ENST00000391278 119 ntBASIC2.98□□□□□ -1.93
NPIPB3Q92617 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NPIPB3Q92617 RPL21P40-201ENST00000428586 483 ntBASIC2.98□□□□□ -1.93
NPIPB3Q92617 AC006946.1-201ENST00000429106 328 ntBASIC2.98□□□□□ -1.93
NPIPB3Q92617 AC018644.1-201ENST00000429934 551 ntBASIC2.98□□□□□ -1.93
NPIPB3Q92617 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.98□□□□□ -1.93
NPIPB3Q92617 NUTF2P7-201ENST00000453086 375 ntBASIC2.98□□□□□ -1.93
NPIPB3Q92617 RNU7-170P-201ENST00000459303 61 ntBASIC2.98□□□□□ -1.93
NPIPB3Q92617 AC008571.1-201ENST00000467232 300 ntBASIC2.98□□□□□ -1.93
NPIPB3Q92617 RPS27P26-201ENST00000494583 239 ntBASIC2.98□□□□□ -1.93
NPIPB3Q92617 PTP4A1P4-201ENST00000512479 322 ntBASIC2.98□□□□□ -1.93
NPIPB3Q92617 AP005902.1-201ENST00000521358 186 ntBASIC2.98□□□□□ -1.93
NPIPB3Q92617 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms