Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 MIR548F5-201ENST00000408421 86 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.12□□□□□ -1.75
RTF1Q92541 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.12□□□□□ -1.75
RTF1Q92541 MTCO2P12-201ENST00000427426 682 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 ARF4P2-201ENST00000430209 526 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.12□□□□□ -1.75
RTF1Q92541 MTCYBP6-201ENST00000441810 138 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.12□□□□□ -1.75
RTF1Q92541 AC010401.1-201ENST00000463867 348 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 RPL23AP14-201ENST00000468281 468 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 VN1R17P-201ENST00000472048 1090 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.12□□□□□ -1.75
RTF1Q92541 SNORA31.8-201ENST00000516327 108 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 RNU6-273P-201ENST00000516937 96 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.12□□□□□ -1.75
RTF1Q92541 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.12□□□□□ -1.75
RTF1Q92541 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RTF1Q92541 AC011602.1-201ENST00000546484 331 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.12□□□□□ -1.75
RTF1Q92541 FRG2DP-202ENST00000566967 323 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 AC007151.1-201ENST00000572774 483 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 MIR4790-201ENST00000577799 79 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 MIR5692A1-201ENST00000580523 69 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 MIR5692C1-201ENST00000585309 91 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 AC002545.1-201ENST00000592511 181 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RTF1Q92541 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RTF1Q92541 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
RTF1Q92541 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RTF1Q92541 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.11□□□□□ -1.75
RTF1Q92541 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RTF1Q92541 UBE2L2-201ENST00000254302 429 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.11□□□□□ -1.75
RTF1Q92541 AP002088.1-201ENST00000382740 395 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 SNORD116-11-201ENST00000383882 92 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RTF1Q92541 RPL37P10-201ENST00000412884 288 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RTF1Q92541 NDUFB4P7-201ENST00000423198 363 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 RPL27AP8-201ENST00000424277 446 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 AL356867.1-201ENST00000429623 299 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 RPS20P22-201ENST00000473700 357 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 RPS15AP34-201ENST00000487776 387 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 MTND5P5-201ENST00000503764 376 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.11□□□□□ -1.75
RTF1Q92541 AC008885.1-201ENST00000514930 301 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 SCARNA15.1-201ENST00000516384 125 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.11□□□□□ -1.75
RTF1Q92541 COPS8P3-201ENST00000526024 482 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 AP002404.1-201ENST00000532005 451 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.11□□□□□ -1.75
RTF1Q92541 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.11□□□□□ -1.75
RTF1Q92541 ZNF192P1-203ENST00000565888 810 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 AP002826.1-201ENST00000608835 315 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 AL138726.1-201ENST00000614873 333 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 FAM157A-202ENST00000615155 405 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 MIR622-201ENST00000638396 96 ntBASIC4.11□□□□□ -1.75
RTF1Q92541 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RTF1Q92541 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.11□□□□□ -1.75
RTF1Q92541 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTF1Q92541 AC116096.1-201ENST00000566804 2314 ntBASIC4.1□□□□□ -1.75
RTF1Q92541 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTF1Q92541 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RTF1Q92541 RNU6-128P-201ENST00000383976 107 ntBASIC4.1□□□□□ -1.75
RTF1Q92541 Y_RNA.480-201ENST00000384364 102 ntBASIC4.1□□□□□ -1.75
RTF1Q92541 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.1□□□□□ -1.75
RTF1Q92541 AF228730.4-201ENST00000421457 183 ntBASIC4.1□□□□□ -1.75
RTF1Q92541 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.1□□□□□ -1.75
RTF1Q92541 SNAP23P1-201ENST00000433229 246 ntBASIC4.1□□□□□ -1.75
RTF1Q92541 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.1□□□□□ -1.75
RTF1Q92541 RPL32P28-201ENST00000443577 397 ntBASIC4.1□□□□□ -1.75
RTF1Q92541 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.1□□□□□ -1.75
RTF1Q92541 MTND1P17-201ENST00000448961 204 ntBASIC4.1□□□□□ -1.75
RTF1Q92541 Y_RNA.718-201ENST00000517110 102 ntBASIC4.1□□□□□ -1.75
RTF1Q92541 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.1□□□□□ -1.75
RTF1Q92541 ATP5F1P5-201ENST00000526403 760 ntBASIC4.1□□□□□ -1.75
RTF1Q92541 AP005597.4-201ENST00000526762 229 ntBASIC4.1□□□□□ -1.75
RTF1Q92541 AP005639.2-201ENST00000527592 928 ntBASIC4.1□□□□□ -1.75
RTF1Q92541 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.1□□□□□ -1.75
RTF1Q92541 IMMP1LP2-201ENST00000552954 492 ntBASIC4.1□□□□□ -1.75
RTF1Q92541 AC138761.3-201ENST00000579993 334 ntBASIC4.1□□□□□ -1.75
RTF1Q92541 AL670379.10-201ENST00000604330 253 ntBASIC4.1□□□□□ -1.75
RTF1Q92541 AL670379.9-201ENST00000605428 253 ntBASIC4.1□□□□□ -1.75
RTF1Q92541 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.1□□□□□ -1.75
RTF1Q92541 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTF1Q92541 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTF1Q92541 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.1□□□□□ -1.75
RTF1Q92541 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.09□□□□□ -1.75
RTF1Q92541 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RTF1Q92541 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RTF1Q92541 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RTF1Q92541 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.09□□□□□ -1.75
RTF1Q92541 RNU6-1167P-201ENST00000363227 94 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 UBA52P6-201ENST00000399822 382 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.09□□□□□ -1.75
RTF1Q92541 FABP5P14-201ENST00000437273 393 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 AC006539.3-201ENST00000454258 129 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 HMGN1P18-201ENST00000457642 277 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms