Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
DDX1Q92499 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX1Q92499 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX1Q92499 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX1Q92499 UBE3AP2-201ENST00000429033 2259 ntBASIC4.23□□□□□ -1.73
DDX1Q92499 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
DDX1Q92499 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.22□□□□□ -1.73
DDX1Q92499 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.22□□□□□ -1.73
DDX1Q92499 AC007685.1-201ENST00000329806 452 ntBASIC4.22□□□□□ -1.73
DDX1Q92499 Y_RNA.117-201ENST00000363294 101 ntBASIC4.22□□□□□ -1.73
DDX1Q92499 Y_RNA.222-201ENST00000364264 102 ntBASIC4.22□□□□□ -1.73
DDX1Q92499 Y_RNA.276-201ENST00000364732 109 ntBASIC4.22□□□□□ -1.73
DDX1Q92499 HSPE1P26-201ENST00000405341 275 ntBASIC4.22□□□□□ -1.73
DDX1Q92499 RNU2-37P-201ENST00000410695 177 ntBASIC4.22□□□□□ -1.73
DDX1Q92499 Z92545.1-201ENST00000411782 234 ntBASIC4.22□□□□□ -1.73
DDX1Q92499 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX1Q92499 HMGB1P37-201ENST00000439613 609 ntBASIC4.22□□□□□ -1.73
DDX1Q92499 AL392103.1-201ENST00000447000 198 ntBASIC4.22□□□□□ -1.73
DDX1Q92499 RPS23P3-201ENST00000470993 430 ntBASIC4.22□□□□□ -1.73
DDX1Q92499 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX1Q92499 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX1Q92499 TBCAP3-201ENST00000512475 312 ntBASIC4.22□□□□□ -1.73
DDX1Q92499 CYCSP27-201ENST00000527643 293 ntBASIC4.22□□□□□ -1.73
DDX1Q92499 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX1Q92499 AC091516.1-201ENST00000549191 703 ntBASIC4.22□□□□□ -1.73
DDX1Q92499 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX1Q92499 SUB1P3-201ENST00000564581 315 ntBASIC4.22□□□□□ -1.73
DDX1Q92499 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.22□□□□□ -1.73
DDX1Q92499 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.22□□□□□ -1.73
DDX1Q92499 SNORD39.4-201ENST00000620099 78 ntBASIC4.22□□□□□ -1.73
DDX1Q92499 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.22□□□□□ -1.73
DDX1Q92499 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
DDX1Q92499 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
DDX1Q92499 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.22□□□□□ -1.73
DDX1Q92499 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
DDX1Q92499 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
DDX1Q92499 SNORD62.1-201ENST00000362541 86 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 Y_RNA.152-201ENST00000363578 100 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 RNU6-395P-201ENST00000365662 106 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 RNU6-842P-201ENST00000384269 107 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 Y_RNA.480-201ENST00000384364 102 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 PTMAP5-201ENST00000393073 333 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 MIR548M-201ENST00000408260 86 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 SNORA57.3-201ENST00000411095 141 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.21□□□□□ -1.74
DDX1Q92499 AL158156.1-201ENST00000422509 473 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX1Q92499 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.21□□□□□ -1.74
DDX1Q92499 CHEK2P4-201ENST00000450340 246 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 FABP5P15-201ENST00000453566 214 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 AC087884.1-201ENST00000469738 328 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.21□□□□□ -1.74
DDX1Q92499 RPL30P5-201ENST00000494923 336 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 GZMAP1-201ENST00000503054 631 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 SUMO2P6-201ENST00000505273 288 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 AC025465.3-201ENST00000510570 311 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX1Q92499 RNU1-61P-201ENST00000516107 151 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 AL157871.3-201ENST00000557231 293 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 MIR3200-201ENST00000580767 85 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.21□□□□□ -1.74
DDX1Q92499 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.21□□□□□ -1.74
DDX1Q92499 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX1Q92499 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX1Q92499 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX1Q92499 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX1Q92499 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX1Q92499 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX1Q92499 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.21□□□□□ -1.74
DDX1Q92499 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX1Q92499 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.2□□□□□ -1.74
DDX1Q92499 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
DDX1Q92499 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
DDX1Q92499 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
DDX1Q92499 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.2□□□□□ -1.74
DDX1Q92499 IPO8P1-201ENST00000455509 3109 ntBASIC4.2□□□□□ -1.74
DDX1Q92499 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
DDX1Q92499 Y_RNA.14-201ENST00000362415 103 ntBASIC4.2□□□□□ -1.74
DDX1Q92499 Y_RNA.33-201ENST00000362591 102 ntBASIC4.2□□□□□ -1.74
DDX1Q92499 Y_RNA.60-201ENST00000362831 98 ntBASIC4.2□□□□□ -1.74
DDX1Q92499 Y_RNA.214-201ENST00000364201 112 ntBASIC4.2□□□□□ -1.74
DDX1Q92499 Y_RNA.483-201ENST00000384380 101 ntBASIC4.2□□□□□ -1.74
DDX1Q92499 RNU6-33P-201ENST00000384793 107 ntBASIC4.2□□□□□ -1.74
DDX1Q92499 AC139712.2-201ENST00000424302 339 ntBASIC4.2□□□□□ -1.74
DDX1Q92499 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX1Q92499 AC099799.1-201ENST00000439809 192 ntBASIC4.2□□□□□ -1.74
DDX1Q92499 Z82210.1-201ENST00000440037 231 ntBASIC4.2□□□□□ -1.74
DDX1Q92499 AC009901.1-201ENST00000506703 541 ntBASIC4.2□□□□□ -1.74
DDX1Q92499 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX1Q92499 AC008716.1-201ENST00000511084 513 ntBASIC4.2□□□□□ -1.74
DDX1Q92499 RNU6-1332P-201ENST00000516666 104 ntBASIC4.2□□□□□ -1.74
DDX1Q92499 Y_RNA.715-201ENST00000517082 110 ntBASIC4.2□□□□□ -1.74
DDX1Q92499 AC026403.1-201ENST00000518938 295 ntBASIC4.2□□□□□ -1.74
DDX1Q92499 AC022080.3-201ENST00000544433 482 ntBASIC4.2□□□□□ -1.74
DDX1Q92499 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.2□□□□□ -1.74
DDX1Q92499 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX1Q92499 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX1Q92499 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX1Q92499 ZNF192P1-203ENST00000565888 810 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms