Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AC245054.2-201ENST00000415639 319 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 AL353729.1-201ENST00000425044 720 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 HMGB1P9-201ENST00000429856 646 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 AL445584.1-201ENST00000431451 330 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 HMGN2P20-201ENST00000437531 273 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 AL357552.1-201ENST00000445254 415 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 ELOCP24-201ENST00000456370 334 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 AC027575.1-201ENST00000481064 460 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 AC096745.1-201ENST00000509945 370 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 RNU6-1016P-201ENST00000516689 94 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 RNU6-1282P-201ENST00000516735 96 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 RNA5SP165-201ENST00000517142 115 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 AC025755.1-201ENST00000521306 278 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 AL121821.2-201ENST00000556081 394 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 MIR5690-201ENST00000583739 73 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 AC006130.2-201ENST00000586202 326 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 NUTF2P8-201ENST00000604593 363 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 RNU6-85P-201ENST00000605989 107 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 AL110115.1-201ENST00000614396 364 ntBASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCHCR1Q8TD31 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 Y_RNA.128-201ENST00000363391 112 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 Y_RNA.187-201ENST00000363918 113 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 RNU6-1329P-201ENST00000365664 107 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 SNORA40C-201ENST00000391285 128 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 RNU2-68P-201ENST00000410878 191 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 AC245291.1-201ENST00000419501 328 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 SNRPEP9-201ENST00000436794 238 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 HIGD1AP11-201ENST00000438361 280 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 RPS3AP46-201ENST00000448352 682 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 AC084357.1-201ENST00000473404 255 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 AL135752.1-201ENST00000479477 471 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 AC139453.3-201ENST00000493276 369 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 SNORA70.19-201ENST00000516717 90 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 CASP1P1-201ENST00000526345 212 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 AP003072.1-201ENST00000531740 145 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 AC004805.2-201ENST00000605382 482 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 AC080078.3-201ENST00000605407 463 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 AL080274.1-201ENST00000605565 220 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 RNU1-30P-201ENST00000606575 163 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 ATP5A1P2-202ENST00000616464 443 ntBASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
CCHCR1Q8TD31 AL161912.2-201ENST00000565707 3007 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 MIR30E-201ENST00000362104 92 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 SNORD62.1-201ENST00000362541 86 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 SNORD14B-201ENST00000364533 90 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 Y_RNA.395-201ENST00000383945 109 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 U8.11-201ENST00000384699 133 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 U8.12-201ENST00000384701 133 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 MIR134-201ENST00000385258 73 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 MIR325-201ENST00000385260 98 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 AL590004.1-201ENST00000405321 300 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 Y_RNA.623-201ENST00000411128 95 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 YPEL5P1-201ENST00000419731 367 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 AL035423.1-201ENST00000420331 213 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 BRK1P2-201ENST00000442875 223 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 U8.18-201ENST00000459285 133 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 RPL23AP67-201ENST00000465341 474 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 AC068657.1-201ENST00000520807 306 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 AC026333.2-201ENST00000542164 106 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 OR1M4P-201ENST00000589199 287 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 CYP2C61P-201ENST00000604072 290 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 AC005034.5-201ENST00000604219 466 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 ELOCP5-201ENST00000604924 333 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 MIR6128-201ENST00000615528 109 ntBASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCHCR1Q8TD31 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms