Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 MIR4423-201ENST00000580922 80 ntBASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 AC067852.4-201ENST00000590314 478 ntBASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 ZYXP1-201ENST00000617638 118 ntBASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 MAPK10-349ENST00000641767 3661 ntBASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 RNU6-926P-201ENST00000384075 107 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 SNORA20-201ENST00000384662 132 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 RANP8-201ENST00000444720 713 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 PTMAP3-201ENST00000447474 330 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 AC234775.1-201ENST00000454247 670 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 RNU6-1211P-201ENST00000459179 105 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 RPS29P19-201ENST00000479709 171 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 HMGB3P3-201ENST00000510526 400 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 SNORA31.3-201ENST00000516029 96 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 AP005660.1-201ENST00000522972 293 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 AC127455.1-201ENST00000565496 145 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 RPL23AP78-201ENST00000599928 470 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 AC005828.6-201ENST00000606610 232 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 MIR6867-201ENST00000610636 67 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 AC131238.1-201ENST00000617135 328 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 AC099506.2-201ENST00000623074 221 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 AL596275.2-206ENST00000641957 626 ntBASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
NEDD1Q8NHV4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 AP001273.1-201ENST00000624493 3152 ntBASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 MIR410-201ENST00000362222 80 ntBASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 Y_RNA.23-201ENST00000362496 106 ntBASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 MIR1179-201ENST00000408703 91 ntBASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 AC007529.1-201ENST00000418574 2178 ntBASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 AC108145.1-201ENST00000503770 153 ntBASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 RNU6-914P-201ENST00000516749 109 ntBASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 SUMO2P18-201ENST00000518873 252 ntBASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 TGIF1P1-201ENST00000558095 802 ntBASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 AC090617.3-201ENST00000573670 475 ntBASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 AL133393.1-201ENST00000603277 287 ntBASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NEDD1Q8NHV4 SCN1A-220ENST00000641603 12506 ntBASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 DDX10P1-201ENST00000448545 1933 ntBASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 AC022893.2-201ENST00000564832 3296 ntBASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 RNU6-755P-201ENST00000364400 103 ntBASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 RNU6-318P-201ENST00000384283 103 ntBASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 Y_RNA.563-201ENST00000384707 108 ntBASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 RNA5SP372-201ENST00000390836 115 ntBASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 RNU6-603P-201ENST00000411403 107 ntBASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 RPL30P3-201ENST00000424262 333 ntBASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 AC024067.1-201ENST00000426199 223 ntBASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 AC005840.1-201ENST00000498412 377 ntBASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 RNU6-390P-201ENST00000516259 103 ntBASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 MIR548AC-201ENST00000585049 88 ntBASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 AL008718.3-201ENST00000610217 321 ntBASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 MIR7151-201ENST00000617477 60 ntBASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 TUG1_4.1-201ENST00000619464 181 ntBASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.92□□□□□ -1.62
NEDD1Q8NHV4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms