Protein–RNA interactions for Protein: Q8NG31

KNL1, Kinetochore scaffold 1, humanhuman

Predictions only

Length 2,342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1Q8NG31 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.31□□□□□ -2.36
KNL1Q8NG31 MIR30A-201ENST00000385092 71 ntBASIC0.31□□□□□ -2.36
KNL1Q8NG31 MTCO1P3-201ENST00000429327 192 ntBASIC0.31□□□□□ -2.36
KNL1Q8NG31 AC104164.3-201ENST00000467363 1258 ntBASIC0.31□□□□□ -2.36
KNL1Q8NG31 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.31□□□□□ -2.36
KNL1Q8NG31 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.31□□□□□ -2.36
KNL1Q8NG31 MTCYBP16-201ENST00000509187 1129 ntBASIC0.31□□□□□ -2.36
KNL1Q8NG31 RNU5A-7P-201ENST00000515979 116 ntBASIC0.31□□□□□ -2.36
KNL1Q8NG31 RNU6-496P-201ENST00000516145 99 ntBASIC0.31□□□□□ -2.36
KNL1Q8NG31 RNU7-40P-201ENST00000516397 64 ntBASIC0.31□□□□□ -2.36
KNL1Q8NG31 RNU4-77P-201ENST00000516692 156 ntBASIC0.31□□□□□ -2.36
KNL1Q8NG31 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.31□□□□□ -2.36
KNL1Q8NG31 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC0.31□□□□□ -2.36
KNL1Q8NG31 MIR4514-201ENST00000581410 57 ntBASIC0.31□□□□□ -2.36
KNL1Q8NG31 MIR4802-201ENST00000581881 80 ntBASIC0.31□□□□□ -2.36
KNL1Q8NG31 MIR4305-201ENST00000583252 102 ntBASIC0.31□□□□□ -2.36
KNL1Q8NG31 HMGN2P15-201ENST00000585707 270 ntBASIC0.31□□□□□ -2.36
KNL1Q8NG31 AC073569.3-201ENST00000619055 682 ntBASIC0.31□□□□□ -2.36
KNL1Q8NG31 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.31□□□□□ -2.36
KNL1Q8NG31 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
KNL1Q8NG31 AL359854.1-201ENST00000614203 1594 ntBASIC0.3□□□□□ -2.36
KNL1Q8NG31 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
KNL1Q8NG31 SNORD114-15-201ENST00000364687 72 ntBASIC0.3□□□□□ -2.36
KNL1Q8NG31 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.3□□□□□ -2.36
KNL1Q8NG31 MTND4P6-201ENST00000438297 472 ntBASIC0.3□□□□□ -2.36
KNL1Q8NG31 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.3□□□□□ -2.36
KNL1Q8NG31 AC008562.1-201ENST00000521763 330 ntBASIC0.3□□□□□ -2.36
KNL1Q8NG31 AC019288.1-201ENST00000557918 224 ntBASIC0.3□□□□□ -2.36
KNL1Q8NG31 MIR4667-201ENST00000578933 66 ntBASIC0.3□□□□□ -2.36
KNL1Q8NG31 AL391597.1-201ENST00000618707 694 ntBASIC0.3□□□□□ -2.36
KNL1Q8NG31 Y_RNA.170-201ENST00000363746 110 ntBASIC0.3□□□□□ -2.36
KNL1Q8NG31 RNU6-923P-201ENST00000364753 107 ntBASIC0.3□□□□□ -2.36
KNL1Q8NG31 RNY4P3-201ENST00000365254 95 ntBASIC0.3□□□□□ -2.36
KNL1Q8NG31 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.3□□□□□ -2.36
KNL1Q8NG31 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
KNL1Q8NG31 RNA5SP56-201ENST00000410277 118 ntBASIC0.3□□□□□ -2.36
KNL1Q8NG31 AL022718.1-201ENST00000412004 84 ntBASIC0.3□□□□□ -2.36
KNL1Q8NG31 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.3□□□□□ -2.36
KNL1Q8NG31 AC093677.1-201ENST00000514414 678 ntBASIC0.3□□□□□ -2.36
KNL1Q8NG31 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.3□□□□□ -2.36
KNL1Q8NG31 AC073544.2-201ENST00000601155 540 ntBASIC0.3□□□□□ -2.36
KNL1Q8NG31 AP003973.1-201ENST00000604639 691 ntBASIC0.3□□□□□ -2.36
KNL1Q8NG31 AC013468.1-201ENST00000608680 598 ntBASIC0.3□□□□□ -2.36
KNL1Q8NG31 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.3□□□□□ -2.36
KNL1Q8NG31 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.3□□□□□ -2.36
KNL1Q8NG31 RNU1-58P-201ENST00000362413 163 ntBASIC0.29□□□□□ -2.36
KNL1Q8NG31 RNU6-98P-201ENST00000384173 107 ntBASIC0.29□□□□□ -2.36
KNL1Q8NG31 Y_RNA.571-201ENST00000384753 98 ntBASIC0.29□□□□□ -2.36
KNL1Q8NG31 AC096649.2-201ENST00000416186 393 ntBASIC0.29□□□□□ -2.36
KNL1Q8NG31 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.29□□□□□ -2.36
KNL1Q8NG31 AL161788.1-201ENST00000441805 169 ntBASIC0.29□□□□□ -2.36
KNL1Q8NG31 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.29□□□□□ -2.36
KNL1Q8NG31 AC104689.1-201ENST00000473356 768 ntBASIC0.29□□□□□ -2.36
KNL1Q8NG31 SNORA4.4-201ENST00000515921 135 ntBASIC0.29□□□□□ -2.36
KNL1Q8NG31 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.29□□□□□ -2.36
KNL1Q8NG31 AL589743.7-201ENST00000612637 233 ntBASIC0.29□□□□□ -2.36
KNL1Q8NG31 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.29□□□□□ -2.36
KNL1Q8NG31 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
KNL1Q8NG31 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.29□□□□□ -2.36
KNL1Q8NG31 SNORA4.1-201ENST00000364263 144 ntBASIC0.29□□□□□ -2.36
KNL1Q8NG31 RNU4-78P-201ENST00000410940 126 ntBASIC0.29□□□□□ -2.36
KNL1Q8NG31 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.29□□□□□ -2.36
KNL1Q8NG31 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.29□□□□□ -2.36
KNL1Q8NG31 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.29□□□□□ -2.36
KNL1Q8NG31 AC138853.1-201ENST00000503549 823 ntBASIC0.29□□□□□ -2.36
KNL1Q8NG31 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.29□□□□□ -2.36
KNL1Q8NG31 RNA5SP137-201ENST00000516833 135 ntBASIC0.29□□□□□ -2.36
KNL1Q8NG31 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.29□□□□□ -2.36
KNL1Q8NG31 MIR4661-201ENST00000582720 75 ntBASIC0.29□□□□□ -2.36
KNL1Q8NG31 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC0.29□□□□□ -2.36
KNL1Q8NG31 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.29□□□□□ -2.36
KNL1Q8NG31 AC108676.2-201ENST00000605225 163 ntBASIC0.29□□□□□ -2.36
KNL1Q8NG31 RNU1-96P-201ENST00000364163 162 ntBASIC0.28□□□□□ -2.36
KNL1Q8NG31 RNA5SP368-201ENST00000364298 116 ntBASIC0.28□□□□□ -2.36
KNL1Q8NG31 HMGN2P39-201ENST00000398005 273 ntBASIC0.28□□□□□ -2.36
KNL1Q8NG31 PIGFP2-201ENST00000421400 651 ntBASIC0.28□□□□□ -2.36
KNL1Q8NG31 RPL36P19-201ENST00000430744 301 ntBASIC0.28□□□□□ -2.36
KNL1Q8NG31 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.28□□□□□ -2.36
KNL1Q8NG31 ZNF680P1-201ENST00000436625 1469 ntBASIC0.28□□□□□ -2.36
KNL1Q8NG31 CR769776.1-201ENST00000441254 787 ntBASIC0.28□□□□□ -2.36
KNL1Q8NG31 MTCO1P53-201ENST00000441633 699 ntBASIC0.28□□□□□ -2.36
KNL1Q8NG31 MTND1P16-201ENST00000465177 898 ntBASIC0.28□□□□□ -2.36
KNL1Q8NG31 RNU6-1095P-201ENST00000516148 108 ntBASIC0.28□□□□□ -2.36
KNL1Q8NG31 RNU6-902P-201ENST00000517212 91 ntBASIC0.28□□□□□ -2.36
KNL1Q8NG31 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.28□□□□□ -2.36
KNL1Q8NG31 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.28□□□□□ -2.36
KNL1Q8NG31 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.28□□□□□ -2.36
KNL1Q8NG31 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.28□□□□□ -2.37
KNL1Q8NG31 SNORA50A-201ENST00000384225 134 ntBASIC0.27□□□□□ -2.37
KNL1Q8NG31 MIR32-201ENST00000384965 70 ntBASIC0.27□□□□□ -2.37
KNL1Q8NG31 NDUFS5P1-201ENST00000405668 289 ntBASIC0.27□□□□□ -2.37
KNL1Q8NG31 Y_RNA.610-201ENST00000410681 103 ntBASIC0.27□□□□□ -2.37
KNL1Q8NG31 AC009518.2-201ENST00000418056 731 ntBASIC0.27□□□□□ -2.37
KNL1Q8NG31 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.27□□□□□ -2.37
KNL1Q8NG31 AL589880.1-201ENST00000448271 287 ntBASIC0.27□□□□□ -2.37
KNL1Q8NG31 KATNBL1P6-201ENST00000453433 915 ntBASIC0.27□□□□□ -2.37
KNL1Q8NG31 AL049714.1-201ENST00000466686 347 ntBASIC0.27□□□□□ -2.37
KNL1Q8NG31 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.27□□□□□ -2.37
KNL1Q8NG31 AC091435.1-201ENST00000505442 584 ntBASIC0.27□□□□□ -2.37
KNL1Q8NG31 SNORA31.6-201ENST00000516241 130 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms