Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RNA5SP388-201ENST00000362584 119 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 RNU1-35P-201ENST00000362782 153 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 Y_RNA.150-201ENST00000363562 102 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 Y_RNA.297-201ENST00000364950 91 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 AP000275.1-201ENST00000411943 390 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 AL356867.1-201ENST00000429623 299 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 PIGFP3-201ENST00000441918 722 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 AL078601.1-201ENST00000444542 271 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 ANP32BP2-201ENST00000454525 545 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 RNU7-87P-201ENST00000459343 62 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 RN7SL585P-201ENST00000470538 280 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 KC877373.1-201ENST00000479066 408 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 RN7SL691P-201ENST00000494487 301 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 RNU4-71P-201ENST00000516258 113 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 RNA5SP165-201ENST00000517142 115 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 AC060766.3-201ENST00000591442 263 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 AL590392.1-201ENST00000604960 446 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 AL356218.2-201ENST00000605264 187 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 AC012603.1-201ENST00000606424 528 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 FAM27D1-201ENST00000612308 341 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 AC004792.1-201ENST00000614523 137 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 SNX18P1Y-201ENST00000616231 511 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 AL356489.2-201ENST00000566968 3528 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 AL359693.1-201ENST00000614959 2407 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 Y_RNA.65-201ENST00000362846 100 ntBASIC3.93□□□□□ -1.78
NUP43Q8NFH3 Y_RNA.143-201ENST00000363520 106 ntBASIC3.93□□□□□ -1.78
NUP43Q8NFH3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 RNU6-741P-201ENST00000383889 107 ntBASIC3.93□□□□□ -1.78
NUP43Q8NFH3 Y_RNA.581-201ENST00000391017 97 ntBASIC3.93□□□□□ -1.78
NUP43Q8NFH3 AL139156.1-201ENST00000412785 841 ntBASIC3.93□□□□□ -1.78
NUP43Q8NFH3 TMEM167AP1-201ENST00000423409 219 ntBASIC3.93□□□□□ -1.78
NUP43Q8NFH3 AL732292.1-201ENST00000426692 226 ntBASIC3.93□□□□□ -1.78
NUP43Q8NFH3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 RPL7AP28-201ENST00000464513 571 ntBASIC3.93□□□□□ -1.78
NUP43Q8NFH3 AC011276.1-201ENST00000469688 323 ntBASIC3.93□□□□□ -1.78
NUP43Q8NFH3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 ANXA2P1-201ENST00000505539 926 ntBASIC3.93□□□□□ -1.78
NUP43Q8NFH3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 RN7SKP21-201ENST00000516503 220 ntBASIC3.93□□□□□ -1.78
NUP43Q8NFH3 Y_RNA.706-201ENST00000516933 99 ntBASIC3.93□□□□□ -1.78
NUP43Q8NFH3 MIR2355-201ENST00000517199 87 ntBASIC3.93□□□□□ -1.78
NUP43Q8NFH3 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.93□□□□□ -1.78
NUP43Q8NFH3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 TVP23BP1-201ENST00000557500 617 ntBASIC3.93□□□□□ -1.78
NUP43Q8NFH3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 AC120057.2-201ENST00000571520 271 ntBASIC3.93□□□□□ -1.78
NUP43Q8NFH3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.93□□□□□ -1.78
NUP43Q8NFH3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 Y_RNA.54-201ENST00000362766 105 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 RNU6-1266P-201ENST00000362794 105 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 RNU6-78P-201ENST00000362897 107 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 RNA5SP509-201ENST00000364577 119 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 Y_RNA.269-201ENST00000364685 89 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 Y_RNA.277-201ENST00000364754 102 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 RNU5E-7P-201ENST00000365290 117 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 Y_RNA.541-201ENST00000384640 113 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 MIR708-201ENST00000390708 88 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 U3.22-201ENST00000391120 215 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms