Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SCARNA16.2-201ENST00000516520 172 ntBASIC0.59□□□□□ -2.31
TTC9CQ8N5M4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.59□□□□□ -2.31
TTC9CQ8N5M4 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.59□□□□□ -2.31
TTC9CQ8N5M4 AC073544.2-201ENST00000601155 540 ntBASIC0.59□□□□□ -2.31
TTC9CQ8N5M4 AC239868.4-201ENST00000608318 671 ntBASIC0.59□□□□□ -2.31
TTC9CQ8N5M4 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.59□□□□□ -2.31
TTC9CQ8N5M4 AC108706.1-201ENST00000611053 297 ntBASIC0.59□□□□□ -2.31
TTC9CQ8N5M4 AC011939.3-201ENST00000613686 466 ntBASIC0.59□□□□□ -2.31
TTC9CQ8N5M4 RNU1-58P-201ENST00000362413 163 ntBASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 RNU1-93P-201ENST00000364704 169 ntBASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 RNU6-968P-201ENST00000384076 107 ntBASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 MIR506-201ENST00000384998 124 ntBASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 MIR1267-201ENST00000408723 78 ntBASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 AC027119.1-201ENST00000440877 241 ntBASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 MOB1AP2-201ENST00000446060 614 ntBASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 AC084024.2-201ENST00000503480 791 ntBASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 AC012213.3-201ENST00000577199 777 ntBASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 AL391646.1-201ENST00000603860 190 ntBASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 AC008945.2-201ENST00000606056 604 ntBASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 AL603758.1-201ENST00000618654 241 ntBASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 MIR8063-201ENST00000621930 81 ntBASIC0.58□□□□□ -2.32
TTC9CQ8N5M4 ZNF849P-201ENST00000594711 1566 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 SNORD1A-201ENST00000364968 72 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 RNU6-1032P-201ENST00000384100 107 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 SNORD14D-201ENST00000384390 87 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 CCNG1P1-201ENST00000406783 885 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 RNU2-64P-201ENST00000411315 191 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 USP9YP33-201ENST00000412220 421 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 AC139712.2-201ENST00000424302 339 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 ISCA1P6-201ENST00000427740 390 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 NANOGP2-201ENST00000435391 727 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 NDUFA5P7-201ENST00000452914 242 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 MEMO1P3-201ENST00000459811 302 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 SNORD116-28-201ENST00000516123 91 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 SNORA31.17-201ENST00000516953 127 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 AC008127.2-201ENST00000549925 1075 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 MIR4781-201ENST00000585250 76 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 AC136443.5-201ENST00000603741 370 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 AL357094.1-201ENST00000603845 844 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 AC017037.3-201ENST00000625016 472 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 HAUS6P2-201ENST00000433254 2404 ntBASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.57□□□□□ -2.32
TTC9CQ8N5M4 AC092125.1-201ENST00000562568 1995 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 RNU5E-8P-201ENST00000363502 116 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 RNU6-819P-201ENST00000364116 107 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 MIR7-1-201ENST00000384871 110 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 MIR1276-201ENST00000408707 83 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 AC009518.2-201ENST00000418056 731 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 HSPE1P13-201ENST00000451143 297 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 PSMC1P5-201ENST00000512850 177 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 PSMA3P-201ENST00000555485 635 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 AL121821.2-201ENST00000556081 394 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 AC109446.2-201ENST00000567872 497 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 LARP7P2-201ENST00000575306 125 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 AC004805.2-201ENST00000605382 482 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 AL022345.1-201ENST00000607292 135 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 AC073569.3-201ENST00000619055 682 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 MIR6835-201ENST00000621552 64 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 AC099654.5-201ENST00000636479 350 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 MIR4275-201ENST00000636486 87 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 AL138713.1-201ENST00000624026 2130 ntBASIC0.56□□□□□ -2.32
TTC9CQ8N5M4 AC018630.2-201ENST00000534866 2403 ntBASIC0.55□□□□□ -2.32
TTC9CQ8N5M4 RNU6-414P-201ENST00000363705 104 ntBASIC0.55□□□□□ -2.32
TTC9CQ8N5M4 RNU6-619P-201ENST00000365146 108 ntBASIC0.55□□□□□ -2.32
TTC9CQ8N5M4 TPMTP3-201ENST00000411928 735 ntBASIC0.55□□□□□ -2.32
TTC9CQ8N5M4 AL592310.1-201ENST00000414330 671 ntBASIC0.55□□□□□ -2.32
TTC9CQ8N5M4 NCOR1P3-201ENST00000420479 303 ntBASIC0.55□□□□□ -2.32
TTC9CQ8N5M4 FO393414.1-201ENST00000428697 1184 ntBASIC0.55□□□□□ -2.32
TTC9CQ8N5M4 MTND5P15-201ENST00000434246 349 ntBASIC0.55□□□□□ -2.32
TTC9CQ8N5M4 RPL32P14-201ENST00000463196 378 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms