Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 RNA5SP507-201ENST00000363603 121 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 RNU6-622P-201ENST00000384272 103 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 SNORA16A-201ENST00000384342 137 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 Y_RNA.506-201ENST00000384494 102 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 MIR195-201ENST00000385194 87 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 RPL19P1-201ENST00000411635 428 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 CRYBB2P1-203ENST00000415709 538 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 POLR2KP2-201ENST00000438155 177 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 HMGB1P37-201ENST00000439613 609 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 RPL7AP61-201ENST00000443410 636 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 AL389915.2-201ENST00000454576 441 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 SNORD2.1-201ENST00000458762 69 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 RPSAP50-201ENST00000481955 852 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 AC020593.1-201ENST00000507399 299 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 ENPP7P9-201ENST00000514456 627 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 AC115990.1-201ENST00000526957 301 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 HMGN2P6-201ENST00000551091 273 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 AL356575.1-201ENST00000603008 283 ntBASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 Y_RNA.331-201ENST00000365267 102 ntBASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 RNU6-187P-201ENST00000384139 106 ntBASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 SNORA36A-201ENST00000384221 132 ntBASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 PTMAP5-201ENST00000393073 333 ntBASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 YPEL5P1-201ENST00000419731 367 ntBASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 AC099548.1-201ENST00000421443 426 ntBASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 RPL12P3-201ENST00000440080 396 ntBASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 RPL39P29-201ENST00000447779 157 ntBASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 AC007215.1-201ENST00000464893 276 ntBASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 AC109925.1-201ENST00000478069 331 ntBASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 AC022441.3-201ENST00000605737 136 ntBASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 AC004825.2-201ENST00000616634 455 ntBASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 AC068870.2-201ENST00000620635 389 ntBASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 AC006001.4-201ENST00000622243 395 ntBASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
DEPDC4Q8N2C3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 AC002543.1-201ENST00000299783 1954 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 RNU6-873P-201ENST00000363833 107 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 RNU6-270P-201ENST00000364131 105 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 Y_RNA.383-201ENST00000383855 97 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 Y_RNA.418-201ENST00000384029 102 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 MIR487A-201ENST00000385009 80 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 MIR105-1-201ENST00000385222 81 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 BX510359.2-201ENST00000417920 305 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 AL772161.1-201ENST00000439130 476 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 CEACAMP7-201ENST00000444105 496 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 AC005042.3-201ENST00000453230 174 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 AP000705.1-201ENST00000454567 350 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 RPL23AP81-201ENST00000455252 467 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 RPS23P7-201ENST00000466210 444 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 NIP7P2-201ENST00000485801 544 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 RN7SL441P-201ENST00000492388 296 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 RNU6-581P-201ENST00000516214 105 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 ACA59.2-201ENST00000517061 156 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 AC006199.1-201ENST00000548728 219 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 AC126177.5-201ENST00000549599 178 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 KLKP1-201ENST00000595979 403 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 AC073349.3-201ENST00000617616 186 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 AL592182.3-201ENST00000642132 3304 ntBASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.68□□□□□ -1.66
DEPDC4Q8N2C3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
DEPDC4Q8N2C3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms