Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 AC104623.2-202ENST00000623477 4002 ntBASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 RNU6-942P-201ENST00000363002 107 ntBASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 RNU6-1180P-201ENST00000364935 107 ntBASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 AL512633.1-201ENST00000399931 655 ntBASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 FTH1P6-201ENST00000430768 320 ntBASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 Y_RNA.694-201ENST00000516677 117 ntBASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 AC090281.1-201ENST00000523019 276 ntBASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 AC008033.2-201ENST00000542626 177 ntBASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 HSPE1P4-201ENST00000550617 308 ntBASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 MTND5P34-201ENST00000568888 325 ntBASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 AC006380.1-201ENST00000603598 186 ntBASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 MIR6844-201ENST00000637122 62 ntBASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 AL450326.2-201ENST00000421913 1962 ntBASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 Z95331.1-201ENST00000623075 23112 ntBASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SCUBE3Q8IX30 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 SNORA73.1-201ENST00000363107 205 ntBASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 RNU4-10P-201ENST00000364383 140 ntBASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 RPL23AP56-201ENST00000460778 453 ntBASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 SNRPGP7-201ENST00000469016 106 ntBASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 RPL36AP41-201ENST00000493820 306 ntBASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 SNORD116-26-201ENST00000516006 96 ntBASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 RNU6-513P-201ENST00000516104 104 ntBASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 RNU6-436P-201ENST00000516171 114 ntBASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 RNA5SP392-201ENST00000516905 112 ntBASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 MIR3674-201ENST00000636576 68 ntBASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SCUBE3Q8IX30 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 AC005332.5-201ENST00000591222 2919 ntBASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 AC134026.1-201ENST00000623249 2239 ntBASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 Y_RNA.293-201ENST00000364908 93 ntBASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 RNU6-407P-201ENST00000365280 104 ntBASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 RNU6-356P-201ENST00000384140 107 ntBASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 MIR23A-201ENST00000385245 73 ntBASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 AL357515.1-201ENST00000402967 542 ntBASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 RN7SKP53-201ENST00000411337 315 ntBASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 RPL35AP21-201ENST00000437667 333 ntBASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 AL121914.1-201ENST00000450188 156 ntBASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 AC073073.1-201ENST00000493920 463 ntBASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 SCARNA8-201ENST00000515924 131 ntBASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 RNU6-453P-201ENST00000516819 85 ntBASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 AL161713.1-201ENST00000555538 145 ntBASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 AC008745.1-201ENST00000604064 271 ntBASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 AC019206.1-201ENST00000621938 425 ntBASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.18□□□□□ -1.58
SCUBE3Q8IX30 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 Y_RNA.24-201ENST00000362508 103 ntBASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 SNORD56.1-201ENST00000362913 68 ntBASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 RNU1-140P-201ENST00000365040 165 ntBASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 SNORA36A-201ENST00000384221 132 ntBASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 RNU6-793P-201ENST00000384233 104 ntBASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 RNU6-178P-201ENST00000384631 104 ntBASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 MIR616-201ENST00000385293 97 ntBASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 MIR888-201ENST00000401186 77 ntBASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 MIR1290-201ENST00000408735 78 ntBASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 AC007738.1-201ENST00000413892 348 ntBASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 AC104333.2-201ENST00000422630 192 ntBASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 SNRPEP9-201ENST00000436794 238 ntBASIC5.17□□□□□ -1.58
SCUBE3Q8IX30 AC112498.1-201ENST00000444401 332 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms