Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 U8.21-201ENST00000459536 136 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 SNORA40.14-201ENST00000516543 86 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 RNU7-4P-201ENST00000516961 62 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 RNA5SP291-201ENST00000517222 105 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 RNA5SP179-201ENST00000517284 121 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 AC016727.2-201ENST00000603988 621 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 AC136601.2-201ENST00000604356 474 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 MTND4LP5-201ENST00000605152 292 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 AC107871.2-201ENST00000612894 502 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 AC032011.1-201ENST00000611703 1549 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 MARK2P15-201ENST00000432204 2186 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 MTND5P9-201ENST00000503854 1755 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 U3.6-201ENST00000363622 211 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 RNU6-784P-201ENST00000384330 106 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 MIR554-201ENST00000384874 96 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 RPL21P1-201ENST00000399532 476 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 USP9YP16-201ENST00000430287 407 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 AL159987.2-201ENST00000432754 307 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 TBCAP1-201ENST00000436520 327 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 USP9YP23-201ENST00000455085 407 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 RPL21P11-201ENST00000461458 483 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 NDUFB4P9-201ENST00000511646 388 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 MIR2114-201ENST00000516645 80 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 TRAV28-201ENST00000557548 323 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 AMZ2P1-203ENST00000565833 850 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 RN7SL703P-201ENST00000578485 302 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 AP000787.2-201ENST00000604432 568 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 AC091167.4-201ENST00000605079 184 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 AC008568.2-201ENST00000623862 2313 ntBASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.88□□□□□ -1.79
TRIM48Q8IWZ4 AC007785.2-201ENST00000598627 1916 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 ZNF299P-201ENST00000406845 1804 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 Y_RNA.26-201ENST00000362539 101 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 SNORA7.2-201ENST00000364446 145 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 SNORA51.11-201ENST00000384442 131 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 Y_RNA.556-201ENST00000384677 113 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 MIR34A-201ENST00000385130 110 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 MIR493-201ENST00000385254 89 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 RNA5SP494-201ENST00000410653 129 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 AL590383.1-201ENST00000428602 75 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 AL078601.1-201ENST00000444542 271 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 AC078817.1-201ENST00000492623 435 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 MTND4LP22-201ENST00000508209 276 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 RNU6-397P-201ENST00000516226 104 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 Y_RNA.668-201ENST00000516233 93 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 RNU6-612P-201ENST00000516909 102 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 AL360157.1-201ENST00000565962 87 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 MIR5685-201ENST00000579080 79 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 AC078899.3-201ENST00000599065 212 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 SRGNP1-201ENST00000603392 451 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 AL645944.1-201ENST00000603857 493 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 AC062037.2-201ENST00000610137 73 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 MIR8076-201ENST00000611401 83 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 MIR8062-201ENST00000621515 85 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 AC008785.1-201ENST00000624475 456 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms