Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC139712.2-201ENST00000424302 339 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VRK3Q8IV63 MTND2P29-201ENST00000438595 412 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.56□□□□□ -1.84
VRK3Q8IV63 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.56□□□□□ -1.84
VRK3Q8IV63 DAP3P1-201ENST00000441522 278 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.56□□□□□ -1.84
VRK3Q8IV63 PRDX3P3-201ENST00000447765 522 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 AC108860.1-201ENST00000484521 383 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.56□□□□□ -1.84
VRK3Q8IV63 RNU6-1023P-201ENST00000516137 106 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 SNORA70.14-201ENST00000516205 110 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.56□□□□□ -1.84
VRK3Q8IV63 IGHV3-76-201ENST00000522465 295 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 AC008489.1-201ENST00000524271 483 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.56□□□□□ -1.84
VRK3Q8IV63 AC007375.1-201ENST00000554513 578 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.56□□□□□ -1.84
VRK3Q8IV63 AC034105.4-201ENST00000568304 277 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 MIR5692A1-201ENST00000580523 69 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 MIR3128-201ENST00000581957 66 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 AC078899.3-201ENST00000599065 212 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 MTND4LP5-201ENST00000605152 292 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 AL160281.1-201ENST00000605307 311 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 RNU6-85P-201ENST00000605989 107 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 AL031601.2-202ENST00000622650 282 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.56□□□□□ -1.84
VRK3Q8IV63 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.56□□□□□ -1.84
VRK3Q8IV63 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
VRK3Q8IV63 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VRK3Q8IV63 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.56□□□□□ -1.84
VRK3Q8IV63 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VRK3Q8IV63 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.55□□□□□ -1.84
VRK3Q8IV63 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.55□□□□□ -1.84
VRK3Q8IV63 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
VRK3Q8IV63 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VRK3Q8IV63 RNU6-288P-201ENST00000363690 104 ntBASIC3.55□□□□□ -1.84
VRK3Q8IV63 Y_RNA.483-201ENST00000384380 101 ntBASIC3.55□□□□□ -1.84
VRK3Q8IV63 MIR578-201ENST00000384828 96 ntBASIC3.55□□□□□ -1.84
VRK3Q8IV63 CYCSP33-201ENST00000414485 327 ntBASIC3.55□□□□□ -1.84
VRK3Q8IV63 SSXP9-201ENST00000417503 292 ntBASIC3.55□□□□□ -1.84
VRK3Q8IV63 DBIP2-201ENST00000419076 262 ntBASIC3.55□□□□□ -1.84
VRK3Q8IV63 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.55□□□□□ -1.84
VRK3Q8IV63 AL159169.1-201ENST00000421119 127 ntBASIC3.55□□□□□ -1.84
VRK3Q8IV63 FTH1P6-201ENST00000430768 320 ntBASIC3.55□□□□□ -1.84
VRK3Q8IV63 AC007389.2-201ENST00000434630 306 ntBASIC3.55□□□□□ -1.84
VRK3Q8IV63 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.55□□□□□ -1.84
VRK3Q8IV63 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.55□□□□□ -1.84
VRK3Q8IV63 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.55□□□□□ -1.84
VRK3Q8IV63 MTND3P25-201ENST00000509243 135 ntBASIC3.55□□□□□ -1.84
VRK3Q8IV63 RNU1-95P-201ENST00000516357 160 ntBASIC3.55□□□□□ -1.84
VRK3Q8IV63 SNORA70.18-201ENST00000516696 98 ntBASIC3.55□□□□□ -1.84
VRK3Q8IV63 RNU1-128P-201ENST00000516704 160 ntBASIC3.55□□□□□ -1.84
VRK3Q8IV63 RNU6-914P-201ENST00000516749 109 ntBASIC3.55□□□□□ -1.84
VRK3Q8IV63 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.55□□□□□ -1.84
VRK3Q8IV63 AC104576.1-201ENST00000524225 88 ntBASIC3.55□□□□□ -1.84
VRK3Q8IV63 SNRPGP16-201ENST00000533275 226 ntBASIC3.55□□□□□ -1.84
VRK3Q8IV63 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.55□□□□□ -1.84
VRK3Q8IV63 CPDP1-201ENST00000579660 283 ntBASIC3.55□□□□□ -1.84
VRK3Q8IV63 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.55□□□□□ -1.84
VRK3Q8IV63 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.55□□□□□ -1.84
VRK3Q8IV63 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VRK3Q8IV63 AC012442.3-202ENST00000636742 206 ntBASIC3.55□□□□□ -1.84
VRK3Q8IV63 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
VRK3Q8IV63 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VRK3Q8IV63 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
VRK3Q8IV63 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VRK3Q8IV63 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.55□□□□□ -1.84
VRK3Q8IV63 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
VRK3Q8IV63 MAPK10-372ENST00000641954 3413 ntBASIC3.54□□□□□ -1.84
VRK3Q8IV63 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
VRK3Q8IV63 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VRK3Q8IV63 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VRK3Q8IV63 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VRK3Q8IV63 OR56A5-201ENST00000340110 738 ntBASIC3.54□□□□□ -1.84
VRK3Q8IV63 Y_RNA.14-201ENST00000362415 103 ntBASIC3.54□□□□□ -1.84
VRK3Q8IV63 SNORD9-201ENST00000362566 104 ntBASIC3.54□□□□□ -1.84
VRK3Q8IV63 RNU6-263P-201ENST00000363811 107 ntBASIC3.54□□□□□ -1.84
VRK3Q8IV63 RNU6-283P-201ENST00000364788 107 ntBASIC3.54□□□□□ -1.84
VRK3Q8IV63 MTHFD2P2-201ENST00000407725 247 ntBASIC3.54□□□□□ -1.84
VRK3Q8IV63 RNU6ATAC-201ENST00000408749 126 ntBASIC3.54□□□□□ -1.84
VRK3Q8IV63 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.54□□□□□ -1.84
VRK3Q8IV63 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.54□□□□□ -1.84
VRK3Q8IV63 AL353621.1-201ENST00000418219 243 ntBASIC3.54□□□□□ -1.84
VRK3Q8IV63 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.54□□□□□ -1.84
VRK3Q8IV63 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.54□□□□□ -1.84
VRK3Q8IV63 AL590664.1-201ENST00000448065 339 ntBASIC3.54□□□□□ -1.84
VRK3Q8IV63 AL031274.1-201ENST00000450334 232 ntBASIC3.54□□□□□ -1.84
VRK3Q8IV63 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.54□□□□□ -1.84
VRK3Q8IV63 SNORA25.11-201ENST00000515935 105 ntBASIC3.54□□□□□ -1.84
VRK3Q8IV63 RNU7-4P-201ENST00000516961 62 ntBASIC3.54□□□□□ -1.84
VRK3Q8IV63 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.54□□□□□ -1.84
VRK3Q8IV63 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
VRK3Q8IV63 CBX3P8-201ENST00000532412 525 ntBASIC3.54□□□□□ -1.84
VRK3Q8IV63 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.54□□□□□ -1.84
VRK3Q8IV63 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.54□□□□□ -1.84
VRK3Q8IV63 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.54□□□□□ -1.84
VRK3Q8IV63 AC006077.1-201ENST00000604746 343 ntBASIC3.54□□□□□ -1.84
VRK3Q8IV63 CR392039.5-201ENST00000623201 510 ntBASIC3.54□□□□□ -1.84
VRK3Q8IV63 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms