Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 HMGB1P35-201ENST00000503360 598 ntBASIC1.27□□□□□ -2.21
LRRC28Q86X40 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
LRRC28Q86X40 FAM206BP-201ENST00000510179 541 ntBASIC1.27□□□□□ -2.21
LRRC28Q86X40 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.27□□□□□ -2.21
LRRC28Q86X40 RNA5SP61-201ENST00000516453 100 ntBASIC1.27□□□□□ -2.21
LRRC28Q86X40 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.27□□□□□ -2.21
LRRC28Q86X40 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.27□□□□□ -2.21
LRRC28Q86X40 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
LRRC28Q86X40 MRPS36P5-201ENST00000551909 298 ntBASIC1.27□□□□□ -2.21
LRRC28Q86X40 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.27□□□□□ -2.21
LRRC28Q86X40 MIR4713-201ENST00000582691 75 ntBASIC1.27□□□□□ -2.21
LRRC28Q86X40 MIR4765-201ENST00000585007 77 ntBASIC1.27□□□□□ -2.21
LRRC28Q86X40 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.27□□□□□ -2.21
LRRC28Q86X40 AC073544.2-201ENST00000601155 540 ntBASIC1.27□□□□□ -2.21
LRRC28Q86X40 AL355598.1-201ENST00000604169 202 ntBASIC1.27□□□□□ -2.21
LRRC28Q86X40 AL645939.4-201ENST00000604495 135 ntBASIC1.27□□□□□ -2.21
LRRC28Q86X40 AL138963.2-201ENST00000605137 226 ntBASIC1.27□□□□□ -2.21
LRRC28Q86X40 BNIP3P10-201ENST00000605360 577 ntBASIC1.27□□□□□ -2.21
LRRC28Q86X40 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.27□□□□□ -2.21
LRRC28Q86X40 AL512598.1-201ENST00000610158 273 ntBASIC1.27□□□□□ -2.21
LRRC28Q86X40 AC006386.1-201ENST00000619436 415 ntBASIC1.27□□□□□ -2.21
LRRC28Q86X40 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
LRRC28Q86X40 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
LRRC28Q86X40 MIR378A-201ENST00000362177 66 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
LRRC28Q86X40 RNA5SP212-201ENST00000391223 107 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.26□□□□□ -2.21
LRRC28Q86X40 RN7SKP266-201ENST00000410232 287 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 RNU2-63P-201ENST00000410792 194 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 USP9YP6-201ENST00000413550 854 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 OR51A5P-201ENST00000415429 942 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 AL449283.1-202ENST00000418249 604 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 BTF3P4-201ENST00000418852 495 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 BTF3L4P3-201ENST00000418879 476 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 PTGES3P4-201ENST00000426243 356 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.26□□□□□ -2.21
LRRC28Q86X40 SNRPEP7-201ENST00000438350 220 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 HMGB1P18-201ENST00000438801 619 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 AC009238.1-201ENST00000442165 424 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 AC009237.6-201ENST00000446969 424 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.26□□□□□ -2.21
LRRC28Q86X40 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.26□□□□□ -2.21
LRRC28Q86X40 AC117503.1-201ENST00000472241 394 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 AC098862.1-201ENST00000504991 413 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 AC093809.1-201ENST00000509155 340 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 SNORA31.24-201ENST00000517232 57 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.26□□□□□ -2.21
LRRC28Q86X40 AL121821.2-201ENST00000556081 394 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 MIR3198-2-201ENST00000577868 80 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.26□□□□□ -2.21
LRRC28Q86X40 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.26□□□□□ -2.21
LRRC28Q86X40 AL133445.2-201ENST00000611191 527 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 AC022202.1-201ENST00000613515 211 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 MIR6134-201ENST00000617606 109 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 AC138627.2-201ENST00000624202 601 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 PCMTD1P7-201ENST00000634506 357 ntBASIC1.26□□□□□ -2.21
LRRC28Q86X40 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
LRRC28Q86X40 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
LRRC28Q86X40 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
LRRC28Q86X40 RNU6-853P-201ENST00000364306 107 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 MIR150-201ENST00000385048 84 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 BTF3L4P2-201ENST00000392798 346 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.25□□□□□ -2.21
LRRC28Q86X40 TXNL1P1-201ENST00000429528 554 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 GPM6BP2-201ENST00000432046 144 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 GPM6BP1-201ENST00000446387 144 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 RPL7P43-201ENST00000478876 753 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.25□□□□□ -2.21
LRRC28Q86X40 RPF2P2-201ENST00000504693 896 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 SMURF2P1-201ENST00000514992 481 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 RNA5SP112-201ENST00000515937 99 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.25□□□□□ -2.21
LRRC28Q86X40 AC010376.1-201ENST00000522101 334 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.25□□□□□ -2.21
LRRC28Q86X40 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.25□□□□□ -2.21
LRRC28Q86X40 AC093012.1-202ENST00000549403 582 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 AC016925.2-201ENST00000605108 242 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
LRRC28Q86X40 PRR13P7-201ENST00000605538 430 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 AC131235.4-201ENST00000609288 620 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 AC245297.2-201ENST00000610119 565 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 RNU6-1192P-201ENST00000612197 107 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 RNU6-489P-201ENST00000618289 107 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 AL109620.1-201ENST00000618738 1197 ntBASIC1.25□□□□□ -2.21
LRRC28Q86X40 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
LRRC28Q86X40 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.24□□□□□ -2.21
LRRC28Q86X40 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.24□□□□□ -2.21
LRRC28Q86X40 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.24□□□□□ -2.21
LRRC28Q86X40 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.24□□□□□ -2.21
LRRC28Q86X40 RNU6-512P-201ENST00000364438 103 ntBASIC1.24□□□□□ -2.21
LRRC28Q86X40 RNU6-658P-201ENST00000384606 106 ntBASIC1.24□□□□□ -2.21
LRRC28Q86X40 MIR518D-201ENST00000385014 87 ntBASIC1.24□□□□□ -2.21
LRRC28Q86X40 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
LRRC28Q86X40 NDUFS5P1-201ENST00000405668 289 ntBASIC1.24□□□□□ -2.21
LRRC28Q86X40 AC069282.1-201ENST00000411911 526 ntBASIC1.24□□□□□ -2.21
LRRC28Q86X40 AP1B1P2-201ENST00000416196 106 ntBASIC1.24□□□□□ -2.21
LRRC28Q86X40 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms