Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AC115115.1-201ENST00000449927 248 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 ANP32BP2-201ENST00000454525 545 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USP48Q86UV5 RNU7-187P-201ENST00000458985 68 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 RN7SL93P-201ENST00000463035 293 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 Y_RNA.670-201ENST00000516255 105 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 AL117187.1-201ENST00000555482 181 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.62□□□□□ -1.67
USP48Q86UV5 ZNF192P1-203ENST00000565888 810 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 MIR5187-201ENST00000583479 76 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 VN1R107P-201ENST00000601784 209 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 AC006006.1-201ENST00000603082 144 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 AL645944.1-201ENST00000603857 493 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.62□□□□□ -1.67
USP48Q86UV5 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP48Q86UV5 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP48Q86UV5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.61□□□□□ -1.67
USP48Q86UV5 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
USP48Q86UV5 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
USP48Q86UV5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.61□□□□□ -1.67
USP48Q86UV5 RNU6-1040P-201ENST00000383974 107 ntBASIC4.61□□□□□ -1.67
USP48Q86UV5 SNORA40C-201ENST00000391285 128 ntBASIC4.61□□□□□ -1.67
USP48Q86UV5 MIR548F4-201ENST00000408515 105 ntBASIC4.61□□□□□ -1.67
USP48Q86UV5 U3.42-201ENST00000408746 214 ntBASIC4.61□□□□□ -1.67
USP48Q86UV5 AC018865.2-201ENST00000423631 129 ntBASIC4.61□□□□□ -1.67
USP48Q86UV5 AL160004.2-201ENST00000432935 350 ntBASIC4.61□□□□□ -1.67
USP48Q86UV5 AL512844.2-201ENST00000433990 593 ntBASIC4.61□□□□□ -1.67
USP48Q86UV5 AP001486.1-201ENST00000463339 476 ntBASIC4.61□□□□□ -1.67
USP48Q86UV5 RPS23P3-201ENST00000470993 430 ntBASIC4.61□□□□□ -1.67
USP48Q86UV5 AC139453.3-201ENST00000493276 369 ntBASIC4.61□□□□□ -1.67
USP48Q86UV5 SNORA31.19-201ENST00000517079 126 ntBASIC4.61□□□□□ -1.67
USP48Q86UV5 RNU6-988P-201ENST00000519081 107 ntBASIC4.61□□□□□ -1.67
USP48Q86UV5 AC007458.1-201ENST00000542812 373 ntBASIC4.61□□□□□ -1.67
USP48Q86UV5 MIR4680-201ENST00000580906 66 ntBASIC4.61□□□□□ -1.67
USP48Q86UV5 AC123912.5-201ENST00000605470 343 ntBASIC4.61□□□□□ -1.67
USP48Q86UV5 AC004825.2-201ENST00000616634 455 ntBASIC4.61□□□□□ -1.67
USP48Q86UV5 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
USP48Q86UV5 AC118273.1-201ENST00000525324 3006 ntBASIC4.61□□□□□ -1.67
USP48Q86UV5 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
USP48Q86UV5 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.61□□□□□ -1.67
USP48Q86UV5 AC090740.1-201ENST00000623193 2262 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 AC007685.1-201ENST00000329806 452 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 RNU6-1115P-201ENST00000362490 106 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 RNU6-196P-201ENST00000384315 107 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 RNU6-140P-201ENST00000384566 108 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 MIR517A-201ENST00000385001 87 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 AL096701.2-201ENST00000416920 238 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 AC007560.1-201ENST00000426912 237 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 AC092573.2-201ENST00000434546 243 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 AC108059.2-201ENST00000434626 151 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.6□□□□□ -1.67
USP48Q86UV5 MIR2053-201ENST00000459295 91 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 AL049873.1-201ENST00000480540 376 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 RNU6-976P-201ENST00000516086 111 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 RNU6-572P-201ENST00000516724 80 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 RNU6-1282P-201ENST00000516735 96 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 RN7SKP295-201ENST00000517264 153 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USP48Q86UV5 AP000787.2-201ENST00000604432 568 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 AL591424.2-201ENST00000617023 128 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 AC119674.1-207ENST00000641355 633 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
USP48Q86UV5 MTND5P30-201ENST00000452896 1731 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 AL672296.1-201ENST00000427780 2158 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
USP48Q86UV5 AL133383.2-201ENST00000622958 2336 ntBASIC4.6□□□□□ -1.67
USP48Q86UV5 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
USP48Q86UV5 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
USP48Q86UV5 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.59□□□□□ -1.67
USP48Q86UV5 RNU6-890P-201ENST00000384121 107 ntBASIC4.59□□□□□ -1.67
USP48Q86UV5 MIR128-1-201ENST00000384921 82 ntBASIC4.59□□□□□ -1.67
USP48Q86UV5 MIR10A-201ENST00000385043 110 ntBASIC4.59□□□□□ -1.67
USP48Q86UV5 MIR34A-201ENST00000385130 110 ntBASIC4.59□□□□□ -1.67
USP48Q86UV5 RNU6-1106P-201ENST00000390845 107 ntBASIC4.59□□□□□ -1.67
USP48Q86UV5 RNU6-985P-201ENST00000410182 104 ntBASIC4.59□□□□□ -1.67
USP48Q86UV5 RNU2-37P-201ENST00000410695 177 ntBASIC4.59□□□□□ -1.67
USP48Q86UV5 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.59□□□□□ -1.67
USP48Q86UV5 USP9YP30-201ENST00000430729 455 ntBASIC4.59□□□□□ -1.67
USP48Q86UV5 SNRPEP4-201ENST00000435815 279 ntBASIC4.59□□□□□ -1.67
USP48Q86UV5 HMGB1P12-201ENST00000438594 598 ntBASIC4.59□□□□□ -1.67
USP48Q86UV5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.59□□□□□ -1.67
USP48Q86UV5 AL078601.1-201ENST00000444542 271 ntBASIC4.59□□□□□ -1.67
USP48Q86UV5 AC133473.1-201ENST00000455173 299 ntBASIC4.59□□□□□ -1.67
USP48Q86UV5 AC018437.1-201ENST00000492214 406 ntBASIC4.59□□□□□ -1.67
USP48Q86UV5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.59□□□□□ -1.67
USP48Q86UV5 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
USP48Q86UV5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
USP48Q86UV5 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.59□□□□□ -1.67
USP48Q86UV5 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.59□□□□□ -1.67
USP48Q86UV5 AC087588.2-201ENST00000617667 426 ntBASIC4.59□□□□□ -1.67
USP48Q86UV5 AC048347.1-201ENST00000624621 427 ntBASIC4.59□□□□□ -1.67
USP48Q86UV5 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
USP48Q86UV5 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
USP48Q86UV5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
USP48Q86UV5 RNU1-18P-201ENST00000363062 164 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 Y_RNA.151-201ENST00000363566 112 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 Y_RNA.404-201ENST00000383978 102 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 Y_RNA.473-201ENST00000384333 102 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms