Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 RPS3AP12-201ENST00000443616 753 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 TAF9P1-201ENST00000445421 515 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 KATNBL1P6-201ENST00000453433 915 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 CACYBPP2-201ENST00000453625 678 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 TAF9P2-201ENST00000454958 515 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 MTAPP1-201ENST00000489154 819 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 HMGB1P35-201ENST00000503360 598 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 RBBP4P6-201ENST00000508098 202 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 AC096725.1-201ENST00000514266 313 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 RNU6-1129P-201ENST00000515964 104 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 RNU6-415P-201ENST00000516252 97 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 RN7SKP265-201ENST00000516448 223 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 Y_RNA.687-201ENST00000516558 91 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 MIR514B-201ENST00000516774 80 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 RNU6-586P-201ENST00000517265 104 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 AC022616.3-201ENST00000523940 148 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 AC022878.1-201ENST00000530684 149 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 AC008521.1-201ENST00000587471 187 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 CLIC4P2-201ENST00000601934 717 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 APOOP1-201ENST00000604695 592 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 AL627230.6-201ENST00000611129 280 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 AL392048.1-201ENST00000613946 534 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 AC098657.3-201ENST00000620434 263 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 AC068787.1-201ENST00000623908 691 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 AL157786.1-207ENST00000627771 695 ntBASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
MRPL55Q7Z7F7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 GNG5P1-201ENST00000255500 204 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 RNA5SP276-201ENST00000362580 94 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 RNU6-61P-201ENST00000365528 109 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 RNU6-1274P-201ENST00000384557 107 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 RNU2-39P-201ENST00000410604 198 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AC138623.1-201ENST00000418060 216 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AL031659.1-201ENST00000447075 539 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 USP9YP12-201ENST00000450481 570 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AL121594.1-201ENST00000475906 575 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AC011825.1-201ENST00000484967 388 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AC090255.1-201ENST00000495779 349 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AC005178.1-201ENST00000508392 440 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 RNU1-86P-201ENST00000516108 154 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 RNU1-107P-201ENST00000516617 154 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 CKS1BP7-201ENST00000522230 235 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 CYCSP27-201ENST00000527643 293 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 ELOCP29-201ENST00000588193 334 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AC234772.3-201ENST00000602277 528 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AL022161.1-201ENST00000604390 213 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 AL137790.1-201ENST00000634283 177 ntBASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
MRPL55Q7Z7F7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.62□□□□□ -2.15
MRPL55Q7Z7F7 ZNF702P-202ENST00000434269 1966 ntBASIC1.62□□□□□ -2.15
MRPL55Q7Z7F7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
MRPL55Q7Z7F7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
MRPL55Q7Z7F7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.62□□□□□ -2.15
MRPL55Q7Z7F7 RNU6-1179P-201ENST00000384667 107 ntBASIC1.62□□□□□ -2.15
MRPL55Q7Z7F7 RPL23AP32-201ENST00000395315 459 ntBASIC1.62□□□□□ -2.15
MRPL55Q7Z7F7 RPS3AP36-201ENST00000398190 775 ntBASIC1.62□□□□□ -2.15
MRPL55Q7Z7F7 MRPL42P2-201ENST00000403169 426 ntBASIC1.62□□□□□ -2.15
MRPL55Q7Z7F7 AL162578.1-201ENST00000406202 378 ntBASIC1.62□□□□□ -2.15
MRPL55Q7Z7F7 ELOCP4-201ENST00000420090 333 ntBASIC1.62□□□□□ -2.15
MRPL55Q7Z7F7 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.62□□□□□ -2.15
MRPL55Q7Z7F7 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.62□□□□□ -2.15
MRPL55Q7Z7F7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.62□□□□□ -2.15
MRPL55Q7Z7F7 RPS3P1-201ENST00000456781 192 ntBASIC1.62□□□□□ -2.15
MRPL55Q7Z7F7 PMCHL2-203ENST00000457791 237 ntBASIC1.62□□□□□ -2.15
MRPL55Q7Z7F7 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
MRPL55Q7Z7F7 snoU13.14-201ENST00000459372 104 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms