Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 HMGB1P41-201ENST00000520234 440 ntBASIC2.16□□□□□ -2.06
RAI1Q7Z5J4 AP001893.2-201ENST00000526949 202 ntBASIC2.16□□□□□ -2.06
RAI1Q7Z5J4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.16□□□□□ -2.06
RAI1Q7Z5J4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.16□□□□□ -2.06
RAI1Q7Z5J4 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.16□□□□□ -2.06
RAI1Q7Z5J4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.16□□□□□ -2.06
RAI1Q7Z5J4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.16□□□□□ -2.06
RAI1Q7Z5J4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RAI1Q7Z5J4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
RAI1Q7Z5J4 MTND4P35-201ENST00000604257 1375 ntBASIC2.16□□□□□ -2.06
RAI1Q7Z5J4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
RAI1Q7Z5J4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 HSPA8P4-201ENST00000511877 1920 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 RNU6-82P-201ENST00000363970 107 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 RNU4-48P-201ENST00000365559 182 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 RNU6-898P-201ENST00000365627 104 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 RNU1-73P-201ENST00000383971 164 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 RNU6-348P-201ENST00000384386 107 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 AL590004.2-201ENST00000404787 371 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 SNORD88.1-201ENST00000408684 91 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 RNU2-9P-201ENST00000410194 145 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 NDUFS5P4-201ENST00000412983 318 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 AC080125.1-201ENST00000414888 684 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 USP9YP20-201ENST00000419224 558 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 AC098614.2-201ENST00000426040 255 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 RPL36AP6-201ENST00000435770 321 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 AC012308.1-201ENST00000451232 178 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 snoU13.26-201ENST00000459452 105 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 KLF3P2-201ENST00000465138 268 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 AC105252.1-201ENST00000503089 286 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 IGKV3-31-201ENST00000523109 329 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 OR5BN1P-201ENST00000532955 829 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 AC020895.1-201ENST00000595362 272 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 AC012557.2-201ENST00000605919 418 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 AC008536.2-201ENST00000607284 349 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 AC008498.1-201ENST00000613012 531 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 AP001486.3-201ENST00000615334 372 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.06
RAI1Q7Z5J4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 RNU6-778P-201ENST00000363269 103 ntBASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 RNU6-1280P-201ENST00000365211 107 ntBASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 RNU6-332P-201ENST00000391193 108 ntBASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 MTCO1P21-201ENST00000416634 589 ntBASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 C1DP2-201ENST00000418167 426 ntBASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 ZNF885P-201ENST00000420174 1098 ntBASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 RPL39P36-201ENST00000490784 156 ntBASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 RNU6-506P-201ENST00000516553 94 ntBASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 RNU6-703P-201ENST00000516946 107 ntBASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 RNA5SP337-201ENST00000517007 109 ntBASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 AC109329.1-201ENST00000518744 317 ntBASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 CKS1BP7-201ENST00000522230 235 ntBASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 MTCO3P24-201ENST00000572729 782 ntBASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 MIR4648-201ENST00000580107 72 ntBASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 AC093788.1-201ENST00000609356 927 ntBASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 AC017083.3-201ENST00000609955 700 ntBASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 AC090617.7-201ENST00000623952 126 ntBASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.15□□□□□ -2.07
RAI1Q7Z5J4 AC010680.1-201ENST00000590024 3590 ntBASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 MAPK10-266ENST00000641066 6555 ntBASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 RNU6-1287P-201ENST00000362914 107 ntBASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 SNORA23-201ENST00000365128 182 ntBASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 RNU1-100P-201ENST00000365255 165 ntBASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 Y_RNA.381-201ENST00000365666 102 ntBASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 RNU6-1060P-201ENST00000384664 107 ntBASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 AF274854.1-201ENST00000413236 615 ntBASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 AL135786.1-201ENST00000415892 214 ntBASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 RPL36AP53-201ENST00000432891 316 ntBASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 RPS15AP9-201ENST00000439856 381 ntBASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 FDX1P2-201ENST00000450769 375 ntBASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 RNU6-261P-201ENST00000459506 102 ntBASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 AC019235.1-201ENST00000503847 207 ntBASIC2.14□□□□□ -2.07
RAI1Q7Z5J4 AC091435.1-201ENST00000505442 584 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms