Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
USP41Q3LFD5 HSPA8P4-201ENST00000511877 1920 ntBASIC3.06□□□□□ -1.92
USP41Q3LFD5 SEPT14P4-201ENST00000513445 186 ntBASIC3.06□□□□□ -1.92
USP41Q3LFD5 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.06□□□□□ -1.92
USP41Q3LFD5 FO082796.1-201ENST00000523795 183 ntBASIC3.06□□□□□ -1.92
USP41Q3LFD5 AP003122.3-201ENST00000526316 255 ntBASIC3.06□□□□□ -1.92
USP41Q3LFD5 AC084851.1-201ENST00000529105 249 ntBASIC3.06□□□□□ -1.92
USP41Q3LFD5 HIF1AP1-201ENST00000553642 175 ntBASIC3.06□□□□□ -1.92
USP41Q3LFD5 AL157871.3-201ENST00000557231 293 ntBASIC3.06□□□□□ -1.92
USP41Q3LFD5 MIR1273C-201ENST00000578669 77 ntBASIC3.06□□□□□ -1.92
USP41Q3LFD5 BNIP3P30-201ENST00000601184 574 ntBASIC3.06□□□□□ -1.92
USP41Q3LFD5 MTND4P35-201ENST00000604257 1375 ntBASIC3.06□□□□□ -1.92
USP41Q3LFD5 AL035413.2-201ENST00000604801 525 ntBASIC3.06□□□□□ -1.92
USP41Q3LFD5 DUSP12P1-201ENST00000612874 516 ntBASIC3.06□□□□□ -1.92
USP41Q3LFD5 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.06□□□□□ -1.92
USP41Q3LFD5 YWHAEP7-203ENST00000622054 312 ntBASIC3.06□□□□□ -1.92
USP41Q3LFD5 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.06□□□□□ -1.92
USP41Q3LFD5 MIR3688-2-201ENST00000636963 87 ntBASIC3.06□□□□□ -1.92
USP41Q3LFD5 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.06□□□□□ -1.92
USP41Q3LFD5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
USP41Q3LFD5 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
USP41Q3LFD5 AL136360.1-201ENST00000503377 1900 ntBASIC3.05□□□□□ -1.92
USP41Q3LFD5 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 NACAP2-201ENST00000318548 624 ntBASIC3.05□□□□□ -1.92
USP41Q3LFD5 MIR449A-201ENST00000362113 91 ntBASIC3.05□□□□□ -1.92
USP41Q3LFD5 Y_RNA.38-201ENST00000362617 102 ntBASIC3.05□□□□□ -1.92
USP41Q3LFD5 RNU6-1025P-201ENST00000410629 104 ntBASIC3.05□□□□□ -1.92
USP41Q3LFD5 HSPE1P1-201ENST00000421494 318 ntBASIC3.05□□□□□ -1.92
USP41Q3LFD5 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 GTF2IP20-201ENST00000431663 360 ntBASIC3.05□□□□□ -1.92
USP41Q3LFD5 AC000111.3-201ENST00000433478 193 ntBASIC3.05□□□□□ -1.92
USP41Q3LFD5 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 AC003071.1-201ENST00000451219 789 ntBASIC3.05□□□□□ -1.92
USP41Q3LFD5 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.05□□□□□ -1.92
USP41Q3LFD5 RNU6-1178P-201ENST00000516674 107 ntBASIC3.05□□□□□ -1.92
USP41Q3LFD5 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 MIR548AC-201ENST00000585049 88 ntBASIC3.05□□□□□ -1.92
USP41Q3LFD5 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 MTND4LP5-201ENST00000605152 292 ntBASIC3.05□□□□□ -1.92
USP41Q3LFD5 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
USP41Q3LFD5 AC103988.1-201ENST00000566382 2177 ntBASIC3.04□□□□□ -1.92
USP41Q3LFD5 AL139276.1-201ENST00000311910 1001 ntBASIC3.04□□□□□ -1.92
USP41Q3LFD5 Y_RNA.256-201ENST00000364594 104 ntBASIC3.04□□□□□ -1.92
USP41Q3LFD5 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.04□□□□□ -1.92
USP41Q3LFD5 RNU6-198P-201ENST00000384258 104 ntBASIC3.04□□□□□ -1.92
USP41Q3LFD5 AL606923.1-201ENST00000406616 190 ntBASIC3.04□□□□□ -1.92
USP41Q3LFD5 RNU6-1068P-201ENST00000410958 103 ntBASIC3.04□□□□□ -1.92
USP41Q3LFD5 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.04□□□□□ -1.92
USP41Q3LFD5 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.04□□□□□ -1.92
USP41Q3LFD5 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.04□□□□□ -1.92
USP41Q3LFD5 HMGN2P30-201ENST00000423237 256 ntBASIC3.04□□□□□ -1.92
USP41Q3LFD5 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.04□□□□□ -1.92
USP41Q3LFD5 USP9YP28-201ENST00000435142 589 ntBASIC3.04□□□□□ -1.92
USP41Q3LFD5 AC108938.1-201ENST00000451204 136 ntBASIC3.04□□□□□ -1.92
USP41Q3LFD5 AL109933.2-201ENST00000452651 260 ntBASIC3.04□□□□□ -1.92
USP41Q3LFD5 GSTA11P-201ENST00000452866 669 ntBASIC3.04□□□□□ -1.92
USP41Q3LFD5 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.04□□□□□ -1.92
USP41Q3LFD5 RPL21P41-201ENST00000459863 264 ntBASIC3.04□□□□□ -1.92
USP41Q3LFD5 RPS26P21-201ENST00000475397 348 ntBASIC3.04□□□□□ -1.92
USP41Q3LFD5 RN7SKP282-201ENST00000516824 299 ntBASIC3.04□□□□□ -1.92
USP41Q3LFD5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.04□□□□□ -1.92
USP41Q3LFD5 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.04□□□□□ -1.92
USP41Q3LFD5 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.04□□□□□ -1.92
USP41Q3LFD5 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.04□□□□□ -1.92
USP41Q3LFD5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.04□□□□□ -1.92
USP41Q3LFD5 AP003122.6-201ENST00000623831 495 ntBASIC3.04□□□□□ -1.92
USP41Q3LFD5 FER-210ENST00000628534 558 ntTSL 5 BASIC3.04□□□□□ -1.92
USP41Q3LFD5 MIR6733-201ENST00000635723 61 ntBASIC3.04□□□□□ -1.92
USP41Q3LFD5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
USP41Q3LFD5 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.03□□□□□ -1.92
USP41Q3LFD5 ASNSP3-201ENST00000451989 1306 ntBASIC3.03□□□□□ -1.92
USP41Q3LFD5 RNU6-395P-201ENST00000365662 106 ntBASIC3.03□□□□□ -1.92
USP41Q3LFD5 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.03□□□□□ -1.92
USP41Q3LFD5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
USP41Q3LFD5 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.03□□□□□ -1.92
USP41Q3LFD5 Y_RNA.573-201ENST00000384763 105 ntBASIC3.03□□□□□ -1.92
USP41Q3LFD5 SNORA26.7-201ENST00000391288 122 ntBASIC3.03□□□□□ -1.92
USP41Q3LFD5 RNU6-908P-201ENST00000410160 94 ntBASIC3.03□□□□□ -1.92
USP41Q3LFD5 EEF1A1P40-201ENST00000412883 573 ntBASIC3.03□□□□□ -1.92
USP41Q3LFD5 RPL21P90-201ENST00000415692 466 ntBASIC3.03□□□□□ -1.92
USP41Q3LFD5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.03□□□□□ -1.92
USP41Q3LFD5 AL139415.2-201ENST00000431968 163 ntBASIC3.03□□□□□ -1.92
USP41Q3LFD5 RPL21P2-201ENST00000440049 481 ntBASIC3.03□□□□□ -1.92
USP41Q3LFD5 AP004217.1-201ENST00000480579 346 ntBASIC3.03□□□□□ -1.92
USP41Q3LFD5 MTAPP1-201ENST00000489154 819 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms