Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC96Q2M329 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.21□□□□□ -1.9
CCDC96Q2M329 HMGB1P33-201ENST00000563485 527 ntBASIC3.21□□□□□ -1.9
CCDC96Q2M329 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC96Q2M329 MIR3117-201ENST00000584034 78 ntBASIC3.21□□□□□ -1.9
CCDC96Q2M329 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC96Q2M329 AC010338.1-201ENST00000621823 717 ntBASIC3.21□□□□□ -1.9
CCDC96Q2M329 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC96Q2M329 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC96Q2M329 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
CCDC96Q2M329 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC96Q2M329 AL137003.2-201ENST00000606924 2538 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 RNY1P12-201ENST00000364251 105 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 RNU1-73P-201ENST00000383971 164 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 RNU6-780P-201ENST00000391030 104 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 AL360182.1-201ENST00000397433 468 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 UBE2V1P2-201ENST00000397758 440 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 AL451074.5-201ENST00000415894 435 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 AL096701.2-201ENST00000416920 238 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 NUP35P1-201ENST00000422734 947 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 MTCYBP5-201ENST00000423752 1135 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 ARL5AP4-201ENST00000430731 512 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 RPL23AP30-201ENST00000432419 501 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 FCF1P1-201ENST00000432690 571 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 AC000111.3-201ENST00000433478 193 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC96Q2M329 HMGB3P12-201ENST00000438745 556 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 RBMX2P4-201ENST00000441256 376 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC96Q2M329 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC96Q2M329 AC108938.1-201ENST00000451204 136 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC96Q2M329 AL121769.1-201ENST00000469473 401 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
CCDC96Q2M329 Y_RNA.693-201ENST00000516641 110 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 RNU6-410P-201ENST00000517006 107 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC96Q2M329 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC96Q2M329 AL512310.1-201ENST00000548639 172 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC96Q2M329 AC007151.1-201ENST00000572774 483 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 MTCO3P13-201ENST00000577757 781 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC96Q2M329 MIR5194-201ENST00000582634 120 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 AC025449.1-201ENST00000603896 529 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 MIR203B-201ENST00000636080 86 ntBASIC3.2□□□□□ -1.9
CCDC96Q2M329 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CCDC96Q2M329 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC96Q2M329 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC96Q2M329 AC093536.2-201ENST00000565257 1406 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC96Q2M329 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC96Q2M329 RNU6-1120P-201ENST00000362988 108 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 RNY4P14-201ENST00000363656 96 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 RNU6-960P-201ENST00000364056 120 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 RNU6-1283P-201ENST00000365314 105 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 Y_RNA.372-201ENST00000365599 102 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 Y_RNA.450-201ENST00000384198 113 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 RNA5SP21-201ENST00000410917 96 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC96Q2M329 AC063976.3-201ENST00000426849 329 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC96Q2M329 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC96Q2M329 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC96Q2M329 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC96Q2M329 SNORD97-201ENST00000459187 142 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 AC109927.2-201ENST00000506416 303 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 RNU7-51P-201ENST00000516560 62 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 OR5AQ1P-201ENST00000527596 927 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 OR5BN1P-201ENST00000532955 829 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 AL157687.1-201ENST00000554853 619 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 RPS3AP4-201ENST00000555161 764 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC96Q2M329 MIR4513-201ENST00000581077 86 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 AC098826.3-201ENST00000603823 466 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 DPPA3P3-201ENST00000603842 430 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 AL049779.4-201ENST00000604500 156 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 AL161798.1-201ENST00000604630 131 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 AC007363.1-201ENST00000604736 620 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 AC090115.4-201ENST00000609970 188 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 DUSP12P1-201ENST00000612874 516 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 AC107871.2-201ENST00000612894 502 ntBASIC3.19□□□□□ -1.9
CCDC96Q2M329 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC96Q2M329 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC96Q2M329 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC96Q2M329 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CCDC96Q2M329 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CCDC96Q2M329 AC010329.5-201ENST00000623497 2174 ntBASIC3.18□□□□□ -1.9
CCDC96Q2M329 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC96Q2M329 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CCDC96Q2M329 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC96Q2M329 Y_RNA.9-201ENST00000362354 101 ntBASIC3.18□□□□□ -1.9
CCDC96Q2M329 RNU6-859P-201ENST00000362728 107 ntBASIC3.18□□□□□ -1.9
CCDC96Q2M329 Y_RNA.367-201ENST00000365544 101 ntBASIC3.18□□□□□ -1.9
CCDC96Q2M329 RNU6-1083P-201ENST00000384022 107 ntBASIC3.18□□□□□ -1.9
CCDC96Q2M329 RNU6-456P-201ENST00000384493 107 ntBASIC3.18□□□□□ -1.9
CCDC96Q2M329 MIR196B-201ENST00000384852 84 ntBASIC3.18□□□□□ -1.9
CCDC96Q2M329 MIR1-2-201ENST00000384961 85 ntBASIC3.18□□□□□ -1.9
CCDC96Q2M329 MIR181B1-201ENST00000385240 110 ntBASIC3.18□□□□□ -1.9
CCDC96Q2M329 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 438.5 ms