Protein–RNA interactions for Protein: Q16518

RPE65, Retinoid isomerohydrolase, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPE65Q16518 AC091953.5-201ENST00000622919 233 ntBASIC3.09□□□□□ -1.91
RPE65Q16518 AC091903.1-201ENST00000624322 454 ntBASIC3.09□□□□□ -1.91
RPE65Q16518 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.09□□□□□ -1.91
RPE65Q16518 AC093010.3-201ENST00000570269 15214 ntBASIC3.09□□□□□ -1.92
RPE65Q16518 SRP72P2-201ENST00000344851 1979 ntBASIC3.09□□□□□ -1.92
RPE65Q16518 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.08□□□□□ -1.92
RPE65Q16518 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.08□□□□□ -1.92
RPE65Q16518 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.08□□□□□ -1.92
RPE65Q16518 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.08□□□□□ -1.92
RPE65Q16518 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RPE65Q16518 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
RPE65Q16518 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RPE65Q16518 CBX3P1-201ENST00000325243 554 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RPE65Q16518 SNORD3E-201ENST00000362899 217 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 Y_RNA.279-201ENST00000364763 95 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 RNU1-73P-201ENST00000383971 164 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 SNORA75B-201ENST00000384053 137 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 RNU6-767P-201ENST00000384132 107 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 SNORA7.4-201ENST00000384249 137 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 MIR34A-201ENST00000385130 110 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 RNU6-510P-201ENST00000391239 108 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.08□□□□□ -1.92
RPE65Q16518 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RPE65Q16518 AL356057.2-201ENST00000403318 432 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 Y_RNA.623-201ENST00000411128 95 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 NDUFS5P4-201ENST00000412983 318 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 USP9YP20-201ENST00000419224 558 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 AL645937.1-202ENST00000421799 937 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.08□□□□□ -1.92
RPE65Q16518 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.08□□□□□ -1.92
RPE65Q16518 NDUFB1P2-201ENST00000449477 176 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 PMCHL2-203ENST00000457791 237 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 AC092798.1-201ENST00000458542 409 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 AP002884.2-201ENST00000471647 395 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 AC006445.1-201ENST00000491925 405 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.08□□□□□ -1.92
RPE65Q16518 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 AC069113.1-201ENST00000517763 267 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.08□□□□□ -1.92
RPE65Q16518 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RPE65Q16518 CYCSP27-201ENST00000527643 293 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.08□□□□□ -1.92
RPE65Q16518 PSMA3P-201ENST00000555485 635 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.08□□□□□ -1.92
RPE65Q16518 UBL5P2-201ENST00000583788 219 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.08□□□□□ -1.92
RPE65Q16518 BNIP3P25-201ENST00000596023 559 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.08□□□□□ -1.92
RPE65Q16518 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 AL136221.1-201ENST00000621449 509 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 AC073476.4-201ENST00000628409 72 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 U2.21-201ENST00000637295 81 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.08□□□□□ -1.92
RPE65Q16518 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.08□□□□□ -1.92
RPE65Q16518 AC093908.1-201ENST00000623125 8092 ntBASIC3.08□□□□□ -1.92
RPE65Q16518 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
RPE65Q16518 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.08□□□□□ -1.92
RPE65Q16518 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RPE65Q16518 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RPE65Q16518 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RPE65Q16518 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
RPE65Q16518 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.07□□□□□ -1.92
RPE65Q16518 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.07□□□□□ -1.92
RPE65Q16518 RNU6-778P-201ENST00000363269 103 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 RNU6-1303P-201ENST00000364841 107 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 RNU6-198P-201ENST00000384258 104 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 MIR10A-201ENST00000385043 110 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 MIR483-201ENST00000385070 76 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 SNORA48.8-201ENST00000391324 134 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 RPL5P18-201ENST00000406671 891 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 Y_RNA.604-201ENST00000410574 102 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 RNU6-607P-201ENST00000411283 108 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.07□□□□□ -1.92
RPE65Q16518 RPL35AP12-201ENST00000425362 338 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.07□□□□□ -1.92
RPE65Q16518 HMGB1P9-201ENST00000429856 646 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 AL627311.1-201ENST00000431514 115 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 AL671855.1-201ENST00000446875 1203 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 MTND5P20-201ENST00000448677 143 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.07□□□□□ -1.92
RPE65Q16518 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.07□□□□□ -1.92
RPE65Q16518 AL031183.1-201ENST00000457667 207 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.07□□□□□ -1.92
RPE65Q16518 SNORA14.1-201ENST00000516113 141 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 Y_RNA.702-201ENST00000516843 96 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 RNU6-703P-201ENST00000516946 107 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.07□□□□□ -1.92
RPE65Q16518 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.07□□□□□ -1.92
RPE65Q16518 NACAP3-201ENST00000552100 481 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 AL391261.3-201ENST00000557194 520 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 MTND4LP5-201ENST00000605152 292 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.07□□□□□ -1.92
RPE65Q16518 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RPE65Q16518 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.07□□□□□ -1.92
RPE65Q16518 AL079305.1-201ENST00000623159 3008 ntBASIC3.07□□□□□ -1.92
RPE65Q16518 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
RPE65Q16518 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.07□□□□□ -1.92
RPE65Q16518 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms