Protein–RNA interactions for Protein: Q14994

NR1I3, Nuclear receptor subfamily 1 group I member 3, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3Q14994 AL157871.3-201ENST00000557231 293 ntBASIC4.09□□□□□ -1.75
NR1I3Q14994 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.09□□□□□ -1.75
NR1I3Q14994 MIR1273C-201ENST00000578669 77 ntBASIC4.09□□□□□ -1.75
NR1I3Q14994 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.09□□□□□ -1.75
NR1I3Q14994 AC006557.5-201ENST00000603126 811 ntBASIC4.09□□□□□ -1.75
NR1I3Q14994 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.09□□□□□ -1.75
NR1I3Q14994 AC010900.2-201ENST00000604508 210 ntBASIC4.09□□□□□ -1.75
NR1I3Q14994 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.09□□□□□ -1.75
NR1I3Q14994 MIR6715B-201ENST00000637172 77 ntBASIC4.09□□□□□ -1.75
NR1I3Q14994 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
NR1I3Q14994 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
NR1I3Q14994 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NR1I3Q14994 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NR1I3Q14994 RNU5A-1-201ENST00000362698 116 ntBASIC4.08□□□□□ -1.76
NR1I3Q14994 RNU1-32P-201ENST00000363937 159 ntBASIC4.08□□□□□ -1.76
NR1I3Q14994 SNORA69.1-201ENST00000390904 137 ntBASIC4.08□□□□□ -1.76
NR1I3Q14994 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
NR1I3Q14994 AL513331.1-201ENST00000411908 397 ntBASIC4.08□□□□□ -1.76
NR1I3Q14994 USP9YP7-201ENST00000436723 430 ntBASIC4.08□□□□□ -1.76
NR1I3Q14994 USP9YP32-201ENST00000452432 430 ntBASIC4.08□□□□□ -1.76
NR1I3Q14994 AC022695.1-201ENST00000522089 237 ntBASIC4.08□□□□□ -1.76
NR1I3Q14994 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NR1I3Q14994 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NR1I3Q14994 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.08□□□□□ -1.76
NR1I3Q14994 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
NR1I3Q14994 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.08□□□□□ -1.76
NR1I3Q14994 MIR4458-201ENST00000578872 75 ntBASIC4.08□□□□□ -1.76
NR1I3Q14994 AC009314.1-201ENST00000603871 304 ntBASIC4.08□□□□□ -1.76
NR1I3Q14994 RMST_4.1-201ENST00000616886 107 ntBASIC4.08□□□□□ -1.76
NR1I3Q14994 MIR492-201ENST00000638676 116 ntBASIC4.08□□□□□ -1.76
NR1I3Q14994 OR4G2P-202ENST00000641004 1759 ntBASIC4.08□□□□□ -1.76
NR1I3Q14994 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
NR1I3Q14994 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.08□□□□□ -1.76
NR1I3Q14994 ZNF299P-201ENST00000406845 1804 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
NR1I3Q14994 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NR1I3Q14994 AC007685.1-201ENST00000329806 452 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 RNA5SP42-201ENST00000364278 115 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 RNU6-384P-201ENST00000364900 104 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 RNA5SP97-201ENST00000365006 84 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 RNU6-827P-201ENST00000365553 106 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
NR1I3Q14994 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
NR1I3Q14994 RNU2-33P-201ENST00000410344 192 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.07□□□□□ -1.76
NR1I3Q14994 AL592148.1-201ENST00000413568 445 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 MTCO3P19-201ENST00000415864 321 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 AC007098.1-201ENST00000420122 367 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 AL590135.1-201ENST00000422215 156 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.07□□□□□ -1.76
NR1I3Q14994 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.07□□□□□ -1.76
NR1I3Q14994 RPEP5-201ENST00000441137 268 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.07□□□□□ -1.76
NR1I3Q14994 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.07□□□□□ -1.76
NR1I3Q14994 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.07□□□□□ -1.76
NR1I3Q14994 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.07□□□□□ -1.76
NR1I3Q14994 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.07□□□□□ -1.76
NR1I3Q14994 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.07□□□□□ -1.76
NR1I3Q14994 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.07□□□□□ -1.76
NR1I3Q14994 RNA5SP164-201ENST00000516533 110 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 SCARNA14-201ENST00000516903 136 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
NR1I3Q14994 MIR5701-3-201ENST00000578890 82 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 MIR5701-1-201ENST00000585138 82 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 AC002545.1-201ENST00000592511 181 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 MIR5701-2-201ENST00000615634 82 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 AC137590.2-201ENST00000619709 240 ntBASIC4.07□□□□□ -1.76
NR1I3Q14994 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.07□□□□□ -1.76
NR1I3Q14994 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.07□□□□□ -1.76
NR1I3Q14994 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NR1I3Q14994 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
NR1I3Q14994 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NR1I3Q14994 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.07□□□□□ -1.76
NR1I3Q14994 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NR1I3Q14994 AL356489.2-201ENST00000566968 3528 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
NR1I3Q14994 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NR1I3Q14994 AP000560.1-201ENST00000624150 1937 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 Y_RNA.33-201ENST00000362591 102 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 RNU6-212P-201ENST00000362642 104 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 RNU6-1167P-201ENST00000363227 94 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 RNU6-595P-201ENST00000363944 107 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 RN7SKP227-201ENST00000364445 330 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 RNU6-200P-201ENST00000364743 107 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 RNU6-338P-201ENST00000383888 105 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 RNU6-213P-201ENST00000384051 104 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 MIR215-201ENST00000384858 110 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NR1I3Q14994 RNU6-700P-201ENST00000391043 107 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 MTHFD2P2-201ENST00000407725 247 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 RNU6-1025P-201ENST00000410629 104 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 RNA5SP494-201ENST00000410653 129 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 SNORA57.3-201ENST00000411095 141 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 AL096701.2-201ENST00000416920 238 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 RPL18P10-201ENST00000425606 538 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 AC091390.3-201ENST00000426478 338 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 AC026784.1-201ENST00000507986 352 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms