Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 FABP5P14-201ENST00000437273 393 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AL117351.1-201ENST00000438864 766 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.39□□□□□ -2.19
FOXF1Q12946 AC004854.1-201ENST00000440356 349 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.39□□□□□ -2.19
FOXF1Q12946 BRK1P2-201ENST00000442875 223 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 RPL23AP35-201ENST00000451906 501 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.39□□□□□ -2.19
FOXF1Q12946 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.39□□□□□ -2.19
FOXF1Q12946 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.39□□□□□ -2.19
FOXF1Q12946 AMD1P1-201ENST00000457220 922 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AC117503.1-201ENST00000472241 394 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AC055731.1-201ENST00000474387 401 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AC068781.1-201ENST00000488231 618 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
FOXF1Q12946 MTND3P3-201ENST00000505004 126 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AC020699.1-201ENST00000505161 445 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AC008526.1-201ENST00000509149 338 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AF213884.2-201ENST00000510417 903 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 MRPS33P3-201ENST00000513456 322 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 MTCYBP43-201ENST00000513621 740 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.39□□□□□ -2.19
FOXF1Q12946 AP006587.4-201ENST00000526053 529 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AC023050.2-201ENST00000544968 387 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.39□□□□□ -2.19
FOXF1Q12946 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.39□□□□□ -2.19
FOXF1Q12946 MTND4P33-201ENST00000556706 766 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 SNORD53B-201ENST00000577887 78 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 MIR4524B-201ENST00000581569 115 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AC005034.5-201ENST00000604219 466 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AC068276.1-201ENST00000605793 379 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AC013470.4-201ENST00000619978 986 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AC112204.3-201ENST00000623822 332 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.39□□□□□ -2.19
FOXF1Q12946 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
FOXF1Q12946 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
FOXF1Q12946 RNU6-83P-201ENST00000384568 112 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 RNU6-278P-201ENST00000390945 109 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.38□□□□□ -2.19
FOXF1Q12946 RNU2-63P-201ENST00000410792 194 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 POLHP1-201ENST00000411806 470 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.38□□□□□ -2.19
FOXF1Q12946 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.38□□□□□ -2.19
FOXF1Q12946 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.38□□□□□ -2.19
FOXF1Q12946 AIMP1P2-201ENST00000425294 312 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 AL513185.2-201ENST00000425543 193 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 HMGB1P27-201ENST00000431429 603 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 RPL36AP53-201ENST00000432891 316 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 MTND1P32-201ENST00000433043 938 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.38□□□□□ -2.19
FOXF1Q12946 AC004383.1-201ENST00000438135 289 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 AL161651.1-201ENST00000440882 223 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.38□□□□□ -2.19
FOXF1Q12946 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.38□□□□□ -2.19
FOXF1Q12946 AC018437.1-201ENST00000492214 406 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 AC091965.2-201ENST00000512324 613 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 SCARNA1-201ENST00000517138 166 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 SNORA31.25-201ENST00000517242 134 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 RNU2-19P-201ENST00000517288 84 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.38□□□□□ -2.19
FOXF1Q12946 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.38□□□□□ -2.19
FOXF1Q12946 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.38□□□□□ -2.19
FOXF1Q12946 MIR4529-201ENST00000578110 78 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.38□□□□□ -2.19
FOXF1Q12946 AL670379.6-201ENST00000603753 252 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 AL670379.11-201ENST00000604059 253 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 AL358072.1-201ENST00000604156 575 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 AC008162.1-201ENST00000604718 254 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 AL670379.1-201ENST00000604752 252 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 AL670379.5-201ENST00000605253 252 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 AL670379.12-201ENST00000605291 253 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 AL670379.8-201ENST00000605353 252 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 AL670379.7-201ENST00000605823 252 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 AC091965.4-201ENST00000607691 587 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 uc_338.5-201ENST00000611839 155 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 AL356596.1-201ENST00000624230 379 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 ADAM3A-203ENST00000461344 2157 ntBASIC1.38□□□□□ -2.19
FOXF1Q12946 TEX21P-201ENST00000447107 1476 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 RNU6-457P-201ENST00000363999 107 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 RNA5SP99-201ENST00000364020 114 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
FOXF1Q12946 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.37□□□□□ -2.19
FOXF1Q12946 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.37□□□□□ -2.19
FOXF1Q12946 RNU6-925P-201ENST00000384629 104 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 RNU6-748P-201ENST00000384648 107 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 SNORA67.6-201ENST00000391093 99 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 NDUFS5P1-201ENST00000405668 289 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 MIR1304-201ENST00000408243 91 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 BTF3L4P3-201ENST00000418879 476 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.37□□□□□ -2.19
FOXF1Q12946 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.37□□□□□ -2.19
FOXF1Q12946 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.37□□□□□ -2.19
FOXF1Q12946 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
FOXF1Q12946 TIMM9P1-201ENST00000436122 256 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.37□□□□□ -2.19
FOXF1Q12946 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.37□□□□□ -2.19
FOXF1Q12946 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.37□□□□□ -2.19
FOXF1Q12946 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.37□□□□□ -2.19
FOXF1Q12946 USP9YP25-201ENST00000457708 443 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 RPL22P13-201ENST00000493291 347 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms