Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 RPL5P18-201ENST00000406671 891 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 U3.39-201ENST00000408569 239 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 RNU6ATAC-201ENST00000408749 126 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 ATP5A1P2-201ENST00000412323 255 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 RPL31P12-201ENST00000422587 358 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 AL159987.2-201ENST00000432754 307 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 AC236972.1-201ENST00000433225 199 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 AC007389.2-201ENST00000434630 306 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.15□□□□□ -1.75
SSRP1Q08945 AL031274.1-201ENST00000450334 232 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 PCMTD1P1-201ENST00000455560 355 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 Y_RNA.631-201ENST00000459607 101 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 RPL23AP45-201ENST00000476406 468 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 AC097473.1-201ENST00000508142 408 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 AC006445.2-201ENST00000510061 472 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 RNU6-1183P-201ENST00000517054 60 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 AC023632.4-201ENST00000517783 191 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.15□□□□□ -1.75
SSRP1Q08945 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.15□□□□□ -1.75
SSRP1Q08945 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.15□□□□□ -1.75
SSRP1Q08945 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.15□□□□□ -1.75
SSRP1Q08945 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.15□□□□□ -1.75
SSRP1Q08945 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSRP1Q08945 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSRP1Q08945 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSRP1Q08945 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSRP1Q08945 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
SSRP1Q08945 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSRP1Q08945 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSRP1Q08945 RNA5SP124-201ENST00000362739 110 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 RNU6-884P-201ENST00000363889 107 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 Y_RNA.395-201ENST00000383945 109 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 RNU1-73P-201ENST00000383971 164 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 RNU6-474P-201ENST00000384243 107 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 RNU6-658P-201ENST00000384606 106 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 snosnR66.1-201ENST00000391095 99 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.14□□□□□ -1.75
SSRP1Q08945 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.14□□□□□ -1.75
SSRP1Q08945 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.14□□□□□ -1.75
SSRP1Q08945 USP9YP30-201ENST00000430729 455 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.14□□□□□ -1.75
SSRP1Q08945 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.14□□□□□ -1.75
SSRP1Q08945 AC113155.1-201ENST00000511141 769 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 RNU2-27P-201ENST00000516185 142 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 RNU1-95P-201ENST00000516357 160 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 RNU1-128P-201ENST00000516704 160 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 RNU6-928P-201ENST00000516876 104 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 AC109479.2-201ENST00000517842 174 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 TRMT10BP1-201ENST00000519377 943 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 TRAV32-201ENST00000553993 340 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 CYCSP39-201ENST00000565821 309 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 MIR4738-201ENST00000579134 87 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 MIR3171-201ENST00000584270 74 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.14□□□□□ -1.75
SSRP1Q08945 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.14□□□□□ -1.75
SSRP1Q08945 AL121917.1-203ENST00000605534 577 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 AL591516.1-201ENST00000611326 274 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 AL161629.2-201ENST00000615347 275 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 AC002076.2-201ENST00000617362 122 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SSRP1Q08945 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.14□□□□□ -1.75
SSRP1Q08945 SCARNA4-202ENST00000625402 129 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 SRP72P2-201ENST00000344851 1979 ntBASIC4.14□□□□□ -1.75
SSRP1Q08945 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSRP1Q08945 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSRP1Q08945 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSRP1Q08945 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSRP1Q08945 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSRP1Q08945 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.13□□□□□ -1.75
SSRP1Q08945 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SSRP1Q08945 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSRP1Q08945 Y_RNA.445-201ENST00000384168 102 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 Y_RNA.473-201ENST00000384333 102 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 MIR559-201ENST00000385188 96 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 MIR23A-201ENST00000385245 73 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 RAB9AP3-201ENST00000412737 573 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.13□□□□□ -1.75
SSRP1Q08945 DAP3P1-201ENST00000441522 278 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 RAB9AP1-201ENST00000449393 573 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 RNU6-1037P-201ENST00000459571 107 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 AC034236.1-201ENST00000469891 373 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 RPL7P42-201ENST00000481005 679 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.13□□□□□ -1.75
SSRP1Q08945 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.13□□□□□ -1.75
SSRP1Q08945 RN7SKP18-201ENST00000516005 275 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 Y_RNA.687-201ENST00000516558 91 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 SNORA70.18-201ENST00000516696 98 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 RNU1-45P-201ENST00000517191 141 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.13□□□□□ -1.75
SSRP1Q08945 HIGD1AP1-201ENST00000550979 275 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 MIR3609-201ENST00000582661 80 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 AC011494.1-201ENST00000596454 237 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 AC012468.1-201ENST00000604888 430 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 MIR6076-201ENST00000617521 113 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 AP003355.3-201ENST00000623465 114 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.13□□□□□ -1.75
SSRP1Q08945 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSRP1Q08945 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
SSRP1Q08945 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSRP1Q08945 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms