Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 MIR8076-201ENST00000611401 83 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 AL162373.1-201ENST00000620433 407 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.8□□□□□ -1.8
IRF9Q00978 AC068724.3-201ENST00000625906 87 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
IRF9Q00978 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
IRF9Q00978 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
IRF9Q00978 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
IRF9Q00978 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.8□□□□□ -1.8
IRF9Q00978 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
IRF9Q00978 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.8□□□□□ -1.8
IRF9Q00978 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
IRF9Q00978 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
IRF9Q00978 CUL1P1-201ENST00000509510 2425 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
IRF9Q00978 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
IRF9Q00978 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
IRF9Q00978 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
IRF9Q00978 RNA5SP502-201ENST00000362694 119 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 RNU6-1309P-201ENST00000363305 108 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 Y_RNA.133-201ENST00000363428 110 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 RN7SKP280-201ENST00000364196 304 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 MIR199A2-201ENST00000385289 110 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 RPL21P65-201ENST00000406094 466 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 U3.37-201ENST00000408528 213 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 AL356095.1-201ENST00000417217 199 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.79□□□□□ -1.8
IRF9Q00978 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.79□□□□□ -1.8
IRF9Q00978 SNORA71B-202ENST00000439232 272 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 HMGB3P8-201ENST00000449709 577 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 BTF3P15-201ENST00000455606 336 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 AC084357.1-201ENST00000473404 255 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 AC015911.1-201ENST00000495111 156 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 UBE2CP3-201ENST00000502715 450 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 AC114801.2-201ENST00000503825 781 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 RNU6-764P-201ENST00000516396 105 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 RNU6-612P-201ENST00000516909 102 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 AP004607.1-201ENST00000524456 203 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.79□□□□□ -1.8
IRF9Q00978 AC025884.1-201ENST00000556034 378 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 LINC00933-203ENST00000559812 219 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 AMZ2P1-203ENST00000565833 850 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.79□□□□□ -1.8
IRF9Q00978 AL020997.2-201ENST00000602607 184 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 AL137849.1-201ENST00000604767 169 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 AC005046.1-201ENST00000608515 625 ntBASIC3.79□□□□□ -1.8
IRF9Q00978 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.79□□□□□ -1.8
IRF9Q00978 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.79□□□□□ -1.8
IRF9Q00978 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.79□□□□□ -1.8
IRF9Q00978 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
IRF9Q00978 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.79□□□□□ -1.8
IRF9Q00978 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
IRF9Q00978 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.79□□□□□ -1.8
IRF9Q00978 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.79□□□□□ -1.8
IRF9Q00978 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
IRF9Q00978 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
IRF9Q00978 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
IRF9Q00978 AC005592.1-201ENST00000566527 1640 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.78□□□□□ -1.8
IRF9Q00978 RNY1P16-201ENST00000363063 111 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 RNU6-884P-201ENST00000363889 107 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 RNU6-1035P-201ENST00000384477 107 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 SNORA70C-201ENST00000384538 135 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 Y_RNA.527-201ENST00000384573 102 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 Y_RNA.533-201ENST00000384596 114 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 Y_RNA.577-201ENST00000384794 101 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 MIR518D-201ENST00000385014 87 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
IRF9Q00978 RPS26P8-201ENST00000393490 348 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.78□□□□□ -1.8
IRF9Q00978 EIF4EP2-201ENST00000422816 654 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 HIGD1AP2-201ENST00000446367 280 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.78□□□□□ -1.8
IRF9Q00978 RNA5SP310-201ENST00000459084 116 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 RN7SKP83-201ENST00000516512 178 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 RNA5SP309-201ENST00000516670 106 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 AC011602.1-201ENST00000546484 331 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.78□□□□□ -1.8
IRF9Q00978 AL158827.2-201ENST00000602494 330 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 AC012468.1-201ENST00000604888 430 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 HMGB1P24-202ENST00000615653 685 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
IRF9Q00978 AL691447.3-201ENST00000635020 330 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
IRF9Q00978 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.78□□□□□ -1.8
IRF9Q00978 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
IRF9Q00978 AL353746.1-201ENST00000566293 6881 ntBASIC3.78□□□□□ -1.8
IRF9Q00978 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
IRF9Q00978 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
IRF9Q00978 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
IRF9Q00978 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
IRF9Q00978 Y_RNA.39-201ENST00000362620 98 ntBASIC3.77□□□□□ -1.81
IRF9Q00978 RNU6-99P-201ENST00000364721 107 ntBASIC3.77□□□□□ -1.81
IRF9Q00978 RNU6-336P-201ENST00000364891 107 ntBASIC3.77□□□□□ -1.81
IRF9Q00978 RNU6-898P-201ENST00000365627 104 ntBASIC3.77□□□□□ -1.81
IRF9Q00978 RPS29P13-201ENST00000402041 169 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms