Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MIR1302-8-201ENST00000408342 128 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.2□□□□□ -2.38
HSPG2P98160 AC096649.2-201ENST00000416186 393 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 OFD1P18Y-201ENST00000420889 959 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.2□□□□□ -2.38
HSPG2P98160 MICF-203ENST00000432679 129 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC0.2□□□□□ -2.38
HSPG2P98160 MTND6P13-201ENST00000443510 523 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.2□□□□□ -2.38
HSPG2P98160 snoU13.28-201ENST00000459235 104 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.2□□□□□ -2.38
HSPG2P98160 RPL22P13-201ENST00000493291 347 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AC007834.2-201ENST00000536310 343 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AC104763.3-201ENST00000613765 618 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AC095031.1-201ENST00000623685 672 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 ZNF663P-202ENST00000641770 1131 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 RNU6-349P-201ENST00000362402 107 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 MIR604-201ENST00000384880 94 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 MIR100-201ENST00000385259 80 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 SSR1P1-201ENST00000407630 814 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AC023141.4-201ENST00000412031 328 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 BTF3P11-201ENST00000426582 477 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AC097499.1-201ENST00000444277 208 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 PNPLA4P1-201ENST00000458328 305 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 RPL31P3-201ENST00000458430 332 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AF213884.2-201ENST00000510417 903 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 RNU6-1004P-201ENST00000516584 111 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.2□□□□□ -2.38
HSPG2P98160 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.2□□□□□ -2.38
HSPG2P98160 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.2□□□□□ -2.38
HSPG2P98160 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.2□□□□□ -2.38
HSPG2P98160 AL359314.1-201ENST00000616913 261 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AC027309.3-201ENST00000623419 351 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 Y_RNA.67-201ENST00000362870 100 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AC007742.1-201ENST00000425789 329 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.2□□□□□ -2.38
HSPG2P98160 ELOCP26-201ENST00000436067 329 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.2□□□□□ -2.38
HSPG2P98160 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.2□□□□□ -2.38
HSPG2P98160 Z83818.1-201ENST00000603584 150 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AP002826.1-201ENST00000608835 315 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AC123767.1-202ENST00000620407 817 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AP002791.1-201ENST00000623291 381 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 RNU6-1249P-201ENST00000363237 111 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AL109913.1-201ENST00000421173 514 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.2□□□□□ -2.38
HSPG2P98160 AC245047.4-201ENST00000433189 144 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.2□□□□□ -2.38
HSPG2P98160 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.2□□□□□ -2.38
HSPG2P98160 MTND1P16-201ENST00000465177 898 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 SNORA70.16-201ENST00000516390 95 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AL049870.4-201ENST00000555741 486 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
HSPG2P98160 AL590410.1-201ENST00000617925 333 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 AC073308.1-201ENST00000623696 305 ntBASIC0.2□□□□□ -2.38
HSPG2P98160 ZNF680P1-201ENST00000436625 1469 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 RNU1-96P-201ENST00000364163 162 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.19□□□□□ -2.38
HSPG2P98160 RNU6-968P-201ENST00000384076 107 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 MIR214-201ENST00000385214 110 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 AL117342.1-201ENST00000404861 406 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 AC083875.1-201ENST00000419509 405 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.19□□□□□ -2.38
HSPG2P98160 AC096920.1-201ENST00000423991 241 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.19□□□□□ -2.38
HSPG2P98160 MTND5P8-201ENST00000449817 1083 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 AC104689.1-201ENST00000473356 768 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.19□□□□□ -2.38
HSPG2P98160 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.19□□□□□ -2.38
HSPG2P98160 MIR4765-201ENST00000585007 77 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 AL355877.2-201ENST00000603670 358 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 AC013470.4-201ENST00000619978 986 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 Y_RNA.476-201ENST00000384347 108 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.19□□□□□ -2.38
HSPG2P98160 RPS24P7-201ENST00000416921 246 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 AC114737.2-201ENST00000421583 173 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.19□□□□□ -2.38
HSPG2P98160 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.19□□□□□ -2.38
HSPG2P98160 AC245102.2-201ENST00000448956 180 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 AC104164.3-201ENST00000467363 1258 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.19□□□□□ -2.38
HSPG2P98160 AC025588.2-201ENST00000604851 466 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.19□□□□□ -2.38
HSPG2P98160 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 SNORD33-201ENST00000362761 85 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 Y_RNA.62-201ENST00000362840 99 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 RNU1-36P-201ENST00000365130 165 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 U6atac.2-201ENST00000408644 118 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 MIR1468-201ENST00000410600 86 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 AL035410.1-201ENST00000427409 427 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 MTCO1P44-201ENST00000441935 243 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.19□□□□□ -2.38
HSPG2P98160 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.19□□□□□ -2.38
HSPG2P98160 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.19□□□□□ -2.38
HSPG2P98160 AC111193.1-201ENST00000504097 155 ntBASIC0.19□□□□□ -2.38
HSPG2P98160 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
HSPG2P98160 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.19□□□□□ -2.38
HSPG2P98160 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.19□□□□□ -2.38
HSPG2P98160 RNU6-798P-201ENST00000516912 103 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms