Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
NKX6-1P78426 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
NKX6-1P78426 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
NKX6-1P78426 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NKX6-1P78426 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NKX6-1P78426 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
NKX6-1P78426 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NKX6-1P78426 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.45□□□□□ -1.86
NKX6-1P78426 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.45□□□□□ -1.86
NKX6-1P78426 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NKX6-1P78426 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX6-1P78426 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX6-1P78426 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NKX6-1P78426 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.44□□□□□ -1.86
NKX6-1P78426 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NKX6-1P78426 AC073346.2-201ENST00000624724 2058 ntBASIC3.44□□□□□ -1.86
NKX6-1P78426 Y_RNA.315-201ENST00000365117 102 ntBASIC3.44□□□□□ -1.86
NKX6-1P78426 RNU6-1280P-201ENST00000365211 107 ntBASIC3.44□□□□□ -1.86
NKX6-1P78426 RNU6-827P-201ENST00000365553 106 ntBASIC3.44□□□□□ -1.86
NKX6-1P78426 MIR518D-201ENST00000385014 87 ntBASIC3.44□□□□□ -1.86
NKX6-1P78426 MTCYBP4-201ENST00000401524 249 ntBASIC3.44□□□□□ -1.86
NKX6-1P78426 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
NKX6-1P78426 RNU4-14P-201ENST00000410858 122 ntBASIC3.44□□□□□ -1.86
NKX6-1P78426 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.44□□□□□ -1.86
NKX6-1P78426 AL714022.1-201ENST00000439897 151 ntBASIC3.44□□□□□ -1.86
NKX6-1P78426 AC124916.1-201ENST00000444020 547 ntBASIC3.44□□□□□ -1.86
NKX6-1P78426 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.44□□□□□ -1.86
NKX6-1P78426 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.44□□□□□ -1.86
NKX6-1P78426 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.44□□□□□ -1.86
NKX6-1P78426 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NKX6-1P78426 HPRT1P3-201ENST00000539521 576 ntBASIC3.44□□□□□ -1.86
NKX6-1P78426 YPEL5P3-201ENST00000547227 352 ntBASIC3.44□□□□□ -1.86
NKX6-1P78426 AC021739.1-201ENST00000559631 174 ntBASIC3.44□□□□□ -1.86
NKX6-1P78426 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.44□□□□□ -1.86
NKX6-1P78426 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.44□□□□□ -1.86
NKX6-1P78426 AL121917.1-203ENST00000605534 577 ntBASIC3.44□□□□□ -1.86
NKX6-1P78426 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.44□□□□□ -1.86
NKX6-1P78426 AC133104.2-201ENST00000615272 193 ntBASIC3.44□□□□□ -1.86
NKX6-1P78426 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.44□□□□□ -1.86
NKX6-1P78426 AL160413.1-201ENST00000622780 310 ntBASIC3.44□□□□□ -1.86
NKX6-1P78426 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
NKX6-1P78426 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
NKX6-1P78426 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.44□□□□□ -1.86
NKX6-1P78426 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NKX6-1P78426 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NKX6-1P78426 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NKX6-1P78426 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.43□□□□□ -1.86
NKX6-1P78426 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NKX6-1P78426 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.43□□□□□ -1.86
NKX6-1P78426 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NKX6-1P78426 RNA5SP399-201ENST00000364003 117 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 RNA5SP72-201ENST00000364442 117 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NKX6-1P78426 RNU6-790P-201ENST00000384479 105 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 RNA5SP252-201ENST00000391131 119 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 SNORA3C-201ENST00000408792 125 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 RNU6-954P-201ENST00000411355 107 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 AL030996.1-201ENST00000411430 235 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.43□□□□□ -1.86
NKX6-1P78426 MTND1P14-201ENST00000427400 950 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 AC005300.1-201ENST00000428401 373 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.43□□□□□ -1.86
NKX6-1P78426 HIGD1AP11-201ENST00000438361 280 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 RNU7-187P-201ENST00000458985 68 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 RPL23AP14-201ENST00000468281 468 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 HMGN2P13-201ENST00000476476 274 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
NKX6-1P78426 AK3P2-201ENST00000507976 429 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 RNU6-711P-201ENST00000517255 106 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 IGKV2-38-201ENST00000517443 247 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.43□□□□□ -1.86
NKX6-1P78426 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.43□□□□□ -1.86
NKX6-1P78426 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 AC024153.1-201ENST00000603103 365 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 AL133255.1-201ENST00000606374 441 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 AL591516.1-201ENST00000611326 274 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 AC084781.2-201ENST00000615568 161 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 U7.8-201ENST00000619968 63 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 FP236240.3-201ENST00000623061 327 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 MTND4LP32-201ENST00000636111 270 ntBASIC3.43□□□□□ -1.86
NKX6-1P78426 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.43□□□□□ -1.86
NKX6-1P78426 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.43□□□□□ -1.86
NKX6-1P78426 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NKX6-1P78426 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
NKX6-1P78426 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NKX6-1P78426 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NKX6-1P78426 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
NKX6-1P78426 RPL9P7-201ENST00000330965 580 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 RNU6-78P-201ENST00000362897 107 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 Y_RNA.151-201ENST00000363566 112 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 SNORA5A-201ENST00000384111 134 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 RNU6-1011P-201ENST00000384668 107 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 MIR517A-201ENST00000385001 87 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 MIR1251-201ENST00000408552 70 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 AC097713.2-201ENST00000430199 356 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.42□□□□□ -1.86
NKX6-1P78426 AL513043.1-201ENST00000439124 535 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 AL031183.1-201ENST00000457667 207 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 U8.21-201ENST00000459536 136 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 RPL9P9-202ENST00000466501 579 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms