Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.6□□□□□ -2.31
UBA52P62987 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.6□□□□□ -2.31
UBA52P62987 USP9YP17-201ENST00000444617 696 ntBASIC0.6□□□□□ -2.31
UBA52P62987 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.6□□□□□ -2.31
UBA52P62987 AP001025.1-201ENST00000486139 332 ntBASIC0.6□□□□□ -2.31
UBA52P62987 AC087854.1-201ENST00000519706 414 ntBASIC0.6□□□□□ -2.31
UBA52P62987 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.6□□□□□ -2.31
UBA52P62987 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.6□□□□□ -2.31
UBA52P62987 AC002400.1-201ENST00000569310 726 ntBASIC0.6□□□□□ -2.31
UBA52P62987 MIR4661-201ENST00000582720 75 ntBASIC0.6□□□□□ -2.31
UBA52P62987 AC005786.1-201ENST00000588553 154 ntBASIC0.6□□□□□ -2.31
UBA52P62987 AL590095.2-201ENST00000604136 117 ntBASIC0.6□□□□□ -2.31
UBA52P62987 AL078604.3-201ENST00000615580 211 ntBASIC0.6□□□□□ -2.31
UBA52P62987 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.6□□□□□ -2.31
UBA52P62987 HAUS6P2-201ENST00000433254 2404 ntBASIC0.6□□□□□ -2.31
UBA52P62987 AC110491.1-201ENST00000562191 2010 ntBASIC0.59□□□□□ -2.31
UBA52P62987 AC009541.1-201ENST00000438279 2662 ntBASIC0.59□□□□□ -2.31
UBA52P62987 RNU6-543P-201ENST00000362576 108 ntBASIC0.59□□□□□ -2.31
UBA52P62987 RNU6-1235P-201ENST00000384559 107 ntBASIC0.59□□□□□ -2.31
UBA52P62987 MIR936-201ENST00000401264 98 ntBASIC0.59□□□□□ -2.31
UBA52P62987 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.59□□□□□ -2.31
UBA52P62987 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.59□□□□□ -2.31
UBA52P62987 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.59□□□□□ -2.31
UBA52P62987 AL512637.2-201ENST00000431287 1256 ntBASIC0.59□□□□□ -2.31
UBA52P62987 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.59□□□□□ -2.31
UBA52P62987 NEFMP1-201ENST00000443423 1006 ntBASIC0.59□□□□□ -2.31
UBA52P62987 MTND1P33-201ENST00000446251 917 ntBASIC0.59□□□□□ -2.31
UBA52P62987 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.59□□□□□ -2.31
UBA52P62987 KATNBL1P6-201ENST00000453433 915 ntBASIC0.59□□□□□ -2.31
UBA52P62987 RNU6-498P-201ENST00000459468 107 ntBASIC0.59□□□□□ -2.31
UBA52P62987 RPS20P20-201ENST00000460498 340 ntBASIC0.59□□□□□ -2.31
UBA52P62987 SMURF2P1-201ENST00000514992 481 ntBASIC0.59□□□□□ -2.31
UBA52P62987 SNORA31.22-201ENST00000517204 135 ntBASIC0.59□□□□□ -2.31
UBA52P62987 COPS8P3-201ENST00000526024 482 ntBASIC0.59□□□□□ -2.31
UBA52P62987 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
UBA52P62987 AC125611.1-201ENST00000549563 229 ntBASIC0.59□□□□□ -2.31
UBA52P62987 CYP4A27P-201ENST00000567218 190 ntBASIC0.59□□□□□ -2.31
UBA52P62987 MIR1273G-201ENST00000577677 100 ntBASIC0.59□□□□□ -2.31
UBA52P62987 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.59□□□□□ -2.31
UBA52P62987 AC112191.3-201ENST00000604371 277 ntBASIC0.59□□□□□ -2.31
UBA52P62987 AC008133.2-201ENST00000624540 351 ntBASIC0.59□□□□□ -2.31
UBA52P62987 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.59□□□□□ -2.32
UBA52P62987 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.58□□□□□ -2.32
UBA52P62987 RNU6-741P-201ENST00000383889 107 ntBASIC0.58□□□□□ -2.32
UBA52P62987 MIR506-201ENST00000384998 124 ntBASIC0.58□□□□□ -2.32
UBA52P62987 MIR625-201ENST00000385047 85 ntBASIC0.58□□□□□ -2.32
UBA52P62987 RNU11-3P-201ENST00000391111 133 ntBASIC0.58□□□□□ -2.32
UBA52P62987 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.58□□□□□ -2.32
UBA52P62987 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
UBA52P62987 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.58□□□□□ -2.32
UBA52P62987 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.58□□□□□ -2.32
UBA52P62987 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.58□□□□□ -2.32
UBA52P62987 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.58□□□□□ -2.32
UBA52P62987 AC006512.1-201ENST00000468816 291 ntBASIC0.58□□□□□ -2.32
UBA52P62987 AC114982.1-201ENST00000469402 321 ntBASIC0.58□□□□□ -2.32
UBA52P62987 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.58□□□□□ -2.32
UBA52P62987 SNORD116-28-201ENST00000516123 91 ntBASIC0.58□□□□□ -2.32
UBA52P62987 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.58□□□□□ -2.32
UBA52P62987 CYB5AP5-201ENST00000549779 389 ntBASIC0.58□□□□□ -2.32
UBA52P62987 AC009268.1-201ENST00000561352 1203 ntBASIC0.58□□□□□ -2.32
UBA52P62987 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
UBA52P62987 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
UBA52P62987 SNORD114-23-201ENST00000363536 72 ntBASIC0.57□□□□□ -2.32
UBA52P62987 RNA5SP100-201ENST00000410903 110 ntBASIC0.57□□□□□ -2.32
UBA52P62987 RNA5SP59-201ENST00000410922 110 ntBASIC0.57□□□□□ -2.32
UBA52P62987 PNRC2P1-201ENST00000423940 420 ntBASIC0.57□□□□□ -2.32
UBA52P62987 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.57□□□□□ -2.32
UBA52P62987 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.57□□□□□ -2.32
UBA52P62987 RPL31P3-201ENST00000458430 332 ntBASIC0.57□□□□□ -2.32
UBA52P62987 RPS27AP10-201ENST00000496103 208 ntBASIC0.57□□□□□ -2.32
UBA52P62987 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.57□□□□□ -2.32
UBA52P62987 ACA64.5-201ENST00000516207 127 ntBASIC0.57□□□□□ -2.32
UBA52P62987 SNORD19.2-201ENST00000516978 73 ntBASIC0.57□□□□□ -2.32
UBA52P62987 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.57□□□□□ -2.32
UBA52P62987 HIGD1AP6-201ENST00000521833 279 ntBASIC0.57□□□□□ -2.32
UBA52P62987 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.57□□□□□ -2.32
UBA52P62987 AC004217.3-201ENST00000551552 878 ntBASIC0.57□□□□□ -2.32
UBA52P62987 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.57□□□□□ -2.32
UBA52P62987 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.57□□□□□ -2.32
UBA52P62987 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.57□□□□□ -2.32
UBA52P62987 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.57□□□□□ -2.32
UBA52P62987 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.57□□□□□ -2.32
UBA52P62987 AL138955.1-201ENST00000622881 1040 ntBASIC0.57□□□□□ -2.32
UBA52P62987 AC092608.3-201ENST00000625017 386 ntBASIC0.57□□□□□ -2.32
UBA52P62987 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.57□□□□□ -2.32
UBA52P62987 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
UBA52P62987 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.57□□□□□ -2.32
UBA52P62987 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.57□□□□□ -2.32
UBA52P62987 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
UBA52P62987 MIR302D-201ENST00000362275 68 ntBASIC0.56□□□□□ -2.32
UBA52P62987 SNORD115-3-201ENST00000363100 82 ntBASIC0.56□□□□□ -2.32
UBA52P62987 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.56□□□□□ -2.32
UBA52P62987 RNU6-968P-201ENST00000384076 107 ntBASIC0.56□□□□□ -2.32
UBA52P62987 RNU6-140P-201ENST00000384566 108 ntBASIC0.56□□□□□ -2.32
UBA52P62987 AL109755.1-201ENST00000401791 649 ntBASIC0.56□□□□□ -2.32
UBA52P62987 AL591034.2-201ENST00000402839 359 ntBASIC0.56□□□□□ -2.32
UBA52P62987 AC069282.1-201ENST00000411911 526 ntBASIC0.56□□□□□ -2.32
UBA52P62987 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.56□□□□□ -2.32
UBA52P62987 ZNF965P-201ENST00000432501 817 ntBASIC0.56□□□□□ -2.32
UBA52P62987 PGBD4P5-201ENST00000445958 426 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms