Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.18□□□□□ -2.06
LIM2P55344 PTGES3P4-201ENST00000426243 356 ntBASIC2.18□□□□□ -2.06
LIM2P55344 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.18□□□□□ -2.06
LIM2P55344 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.18□□□□□ -2.06
LIM2P55344 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.18□□□□□ -2.06
LIM2P55344 MTND1P27-201ENST00000451117 902 ntBASIC2.18□□□□□ -2.06
LIM2P55344 AC022364.2-201ENST00000457963 554 ntBASIC2.18□□□□□ -2.06
LIM2P55344 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LIM2P55344 AC116562.3-201ENST00000506136 177 ntBASIC2.18□□□□□ -2.06
LIM2P55344 SNORD27.1-201ENST00000516319 72 ntBASIC2.18□□□□□ -2.06
LIM2P55344 Y_RNA.695-201ENST00000516715 107 ntBASIC2.18□□□□□ -2.06
LIM2P55344 SNORA18.6-201ENST00000516792 115 ntBASIC2.18□□□□□ -2.06
LIM2P55344 RNU6-685P-201ENST00000517088 95 ntBASIC2.18□□□□□ -2.06
LIM2P55344 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.18□□□□□ -2.06
LIM2P55344 AC068587.5-201ENST00000528506 175 ntBASIC2.18□□□□□ -2.06
LIM2P55344 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.18□□□□□ -2.06
LIM2P55344 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.18□□□□□ -2.06
LIM2P55344 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.18□□□□□ -2.06
LIM2P55344 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.18□□□□□ -2.06
LIM2P55344 AC068790.2-201ENST00000602601 557 ntBASIC2.18□□□□□ -2.06
LIM2P55344 AC072046.2-201ENST00000618366 268 ntBASIC2.18□□□□□ -2.06
LIM2P55344 Z69908.1-201ENST00000622603 247 ntBASIC2.18□□□□□ -2.06
LIM2P55344 AL160394.1-201ENST00000624765 724 ntBASIC2.18□□□□□ -2.06
LIM2P55344 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.18□□□□□ -2.06
LIM2P55344 MIR7515-201ENST00000637837 67 ntBASIC2.18□□□□□ -2.06
LIM2P55344 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.18□□□□□ -2.06
LIM2P55344 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LIM2P55344 AC004520.1-201ENST00000608362 1413 ntBASIC2.17□□□□□ -2.06
LIM2P55344 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.17□□□□□ -2.06
LIM2P55344 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
LIM2P55344 RNU6-61P-201ENST00000365528 109 ntBASIC2.17□□□□□ -2.06
LIM2P55344 Z98749.2-208ENST00000381646 500 ntBASIC2.17□□□□□ -2.06
LIM2P55344 OR5H15-201ENST00000383696 930 ntBASIC2.17□□□□□ -2.06
LIM2P55344 RNU1-138P-201ENST00000384093 164 ntBASIC2.17□□□□□ -2.06
LIM2P55344 RNU6-166P-201ENST00000384371 107 ntBASIC2.17□□□□□ -2.06
LIM2P55344 RNU6-19P-201ENST00000384718 107 ntBASIC2.17□□□□□ -2.06
LIM2P55344 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.17□□□□□ -2.06
LIM2P55344 RPL19P1-201ENST00000411635 428 ntBASIC2.17□□□□□ -2.06
LIM2P55344 OR51A5P-201ENST00000415429 942 ntBASIC2.17□□□□□ -2.06
LIM2P55344 C1DP2-201ENST00000418167 426 ntBASIC2.17□□□□□ -2.06
LIM2P55344 AL160275.3-201ENST00000423876 471 ntBASIC2.17□□□□□ -2.06
LIM2P55344 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.17□□□□□ -2.06
LIM2P55344 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.17□□□□□ -2.06
LIM2P55344 MTCO3P5-201ENST00000433620 714 ntBASIC2.17□□□□□ -2.06
LIM2P55344 AC018634.1-201ENST00000437554 401 ntBASIC2.17□□□□□ -2.06
LIM2P55344 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.17□□□□□ -2.06
LIM2P55344 MTND1P26-201ENST00000440488 538 ntBASIC2.17□□□□□ -2.06
LIM2P55344 MTND2P4-201ENST00000445034 1004 ntBASIC2.17□□□□□ -2.06
LIM2P55344 HIGD1AP2-201ENST00000446367 280 ntBASIC2.17□□□□□ -2.06
LIM2P55344 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.17□□□□□ -2.06
LIM2P55344 FABP5P13-201ENST00000452144 328 ntBASIC2.17□□□□□ -2.06
LIM2P55344 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.17□□□□□ -2.06
LIM2P55344 AL441985.1-201ENST00000457727 251 ntBASIC2.17□□□□□ -2.06
LIM2P55344 GZMAP1-201ENST00000503054 631 ntBASIC2.17□□□□□ -2.06
LIM2P55344 ARL2BPP4-201ENST00000506854 471 ntBASIC2.17□□□□□ -2.06
LIM2P55344 SCARNA17.1-201ENST00000516211 143 ntBASIC2.17□□□□□ -2.06
LIM2P55344 SCARNA17.2-201ENST00000516334 143 ntBASIC2.17□□□□□ -2.06
LIM2P55344 RNA5SP281-201ENST00000516504 135 ntBASIC2.17□□□□□ -2.06
LIM2P55344 RPPH1-2P-201ENST00000516688 293 ntBASIC2.17□□□□□ -2.06
LIM2P55344 SNORA31.15-201ENST00000516771 132 ntBASIC2.17□□□□□ -2.06
LIM2P55344 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.17□□□□□ -2.06
LIM2P55344 OR5AQ1P-201ENST00000527596 927 ntBASIC2.17□□□□□ -2.06
LIM2P55344 AL121821.2-201ENST00000556081 394 ntBASIC2.17□□□□□ -2.06
LIM2P55344 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.17□□□□□ -2.06
LIM2P55344 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.17□□□□□ -2.06
LIM2P55344 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.17□□□□□ -2.06
LIM2P55344 AC110760.3-201ENST00000598794 467 ntBASIC2.17□□□□□ -2.06
LIM2P55344 AC073544.2-201ENST00000601155 540 ntBASIC2.17□□□□□ -2.06
LIM2P55344 RPL23AP88-201ENST00000605759 454 ntBASIC2.17□□□□□ -2.06
LIM2P55344 AC087045.1-201ENST00000605856 382 ntBASIC2.17□□□□□ -2.06
LIM2P55344 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.17□□□□□ -2.06
LIM2P55344 RNU6-91P-201ENST00000607774 107 ntBASIC2.17□□□□□ -2.06
LIM2P55344 SCARNA17.4-201ENST00000614296 143 ntBASIC2.17□□□□□ -2.06
LIM2P55344 uc_338.11-201ENST00000619132 160 ntBASIC2.17□□□□□ -2.06
LIM2P55344 MIR6766-201ENST00000622641 72 ntBASIC2.17□□□□□ -2.06
LIM2P55344 AC110994.2-201ENST00000635481 492 ntBASIC2.17□□□□□ -2.06
LIM2P55344 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
LIM2P55344 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LIM2P55344 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.17□□□□□ -2.06
LIM2P55344 ELL2P3-201ENST00000457883 1602 ntBASIC2.17□□□□□ -2.06
LIM2P55344 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LIM2P55344 AC006020.1-201ENST00000420179 1854 ntBASIC2.16□□□□□ -2.06
LIM2P55344 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LIM2P55344 MIR518D-201ENST00000385014 87 ntBASIC2.16□□□□□ -2.06
LIM2P55344 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LIM2P55344 AF274854.1-201ENST00000413236 615 ntBASIC2.16□□□□□ -2.06
LIM2P55344 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.16□□□□□ -2.06
LIM2P55344 ISCA1P6-201ENST00000427740 390 ntBASIC2.16□□□□□ -2.06
LIM2P55344 AC133104.1-201ENST00000429100 218 ntBASIC2.16□□□□□ -2.06
LIM2P55344 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.16□□□□□ -2.06
LIM2P55344 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.16□□□□□ -2.06
LIM2P55344 KATNBL1P3-201ENST00000443475 909 ntBASIC2.16□□□□□ -2.06
LIM2P55344 AC244505.5-201ENST00000443639 207 ntBASIC2.16□□□□□ -2.06
LIM2P55344 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LIM2P55344 RPL23AP20-201ENST00000447965 421 ntBASIC2.16□□□□□ -2.06
LIM2P55344 EEF1B2P7-201ENST00000451177 676 ntBASIC2.16□□□□□ -2.06
LIM2P55344 BTF3P15-201ENST00000455606 336 ntBASIC2.16□□□□□ -2.06
LIM2P55344 RPL31P3-201ENST00000458430 332 ntBASIC2.16□□□□□ -2.06
LIM2P55344 AC023194.1-201ENST00000493084 308 ntBASIC2.16□□□□□ -2.06
LIM2P55344 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms