Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MIR4285-201ENST00000581001 85 ntBASIC1.14□□□□□ -2.23
NUP98P52948 AC243960.4-201ENST00000600532 288 ntBASIC1.14□□□□□ -2.23
NUP98P52948 DUSP12P1-201ENST00000612874 516 ntBASIC1.14□□□□□ -2.23
NUP98P52948 AC107075.1-201ENST00000613695 314 ntBASIC1.14□□□□□ -2.23
NUP98P52948 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
NUP98P52948 RNU5E-1-201ENST00000362477 120 ntBASIC1.13□□□□□ -2.23
NUP98P52948 RNU6-748P-201ENST00000384648 107 ntBASIC1.13□□□□□ -2.23
NUP98P52948 OR6C66P-201ENST00000414917 930 ntBASIC1.13□□□□□ -2.23
NUP98P52948 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.13□□□□□ -2.23
NUP98P52948 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.13□□□□□ -2.23
NUP98P52948 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.13□□□□□ -2.23
NUP98P52948 ZFAND6P1-201ENST00000434138 605 ntBASIC1.13□□□□□ -2.23
NUP98P52948 AC112771.1-201ENST00000463581 102 ntBASIC1.13□□□□□ -2.23
NUP98P52948 RNU6-840P-201ENST00000517275 65 ntBASIC1.13□□□□□ -2.23
NUP98P52948 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.13□□□□□ -2.23
NUP98P52948 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.13□□□□□ -2.23
NUP98P52948 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
NUP98P52948 AC005332.6-201ENST00000613178 446 ntBASIC1.13□□□□□ -2.23
NUP98P52948 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
NUP98P52948 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
NUP98P52948 AC092634.6-201ENST00000418558 192 ntBASIC1.12□□□□□ -2.23
NUP98P52948 MTCYBP32-201ENST00000427945 1084 ntBASIC1.12□□□□□ -2.23
NUP98P52948 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.12□□□□□ -2.23
NUP98P52948 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.12□□□□□ -2.23
NUP98P52948 AC092427.1-201ENST00000439177 601 ntBASIC1.12□□□□□ -2.23
NUP98P52948 AC114878.1-201ENST00000441166 358 ntBASIC1.12□□□□□ -2.23
NUP98P52948 RNU7-140P-201ENST00000459546 60 ntBASIC1.12□□□□□ -2.23
NUP98P52948 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.12□□□□□ -2.23
NUP98P52948 AC008834.1-201ENST00000511612 175 ntBASIC1.12□□□□□ -2.23
NUP98P52948 RNU5B-3P-201ENST00000516601 115 ntBASIC1.12□□□□□ -2.23
NUP98P52948 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.12□□□□□ -2.23
NUP98P52948 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.12□□□□□ -2.23
NUP98P52948 AL121821.2-201ENST00000556081 394 ntBASIC1.12□□□□□ -2.23
NUP98P52948 MIR98-201ENST00000606724 119 ntBASIC1.12□□□□□ -2.23
NUP98P52948 AC126118.1-201ENST00000607744 628 ntBASIC1.12□□□□□ -2.23
NUP98P52948 AC009237.15-201ENST00000610252 501 ntBASIC1.12□□□□□ -2.23
NUP98P52948 Y_RNA.205-201ENST00000364128 113 ntBASIC1.12□□□□□ -2.23
NUP98P52948 SNORD14B-201ENST00000364533 90 ntBASIC1.12□□□□□ -2.23
NUP98P52948 RNU11-3P-201ENST00000391111 133 ntBASIC1.12□□□□□ -2.23
NUP98P52948 RNU6-516P-201ENST00000411381 104 ntBASIC1.12□□□□□ -2.23
NUP98P52948 AC019178.2-201ENST00000423595 505 ntBASIC1.12□□□□□ -2.23
NUP98P52948 RAC1P8-201ENST00000427086 527 ntBASIC1.12□□□□□ -2.23
NUP98P52948 MTCYBP11-201ENST00000447254 1109 ntBASIC1.12□□□□□ -2.23
NUP98P52948 CYP2C59P-201ENST00000457790 269 ntBASIC1.12□□□□□ -2.23
NUP98P52948 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.12□□□□□ -2.23
NUP98P52948 SMURF2P1-201ENST00000514992 481 ntBASIC1.12□□□□□ -2.23
NUP98P52948 SNORA25.11-201ENST00000515935 105 ntBASIC1.12□□□□□ -2.23
NUP98P52948 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.12□□□□□ -2.23
NUP98P52948 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.12□□□□□ -2.23
NUP98P52948 AL356432.3-201ENST00000568952 465 ntBASIC1.12□□□□□ -2.23
NUP98P52948 AC012213.3-201ENST00000577199 777 ntBASIC1.12□□□□□ -2.23
NUP98P52948 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.12□□□□□ -2.23
NUP98P52948 AC091304.6-201ENST00000619761 202 ntBASIC1.12□□□□□ -2.23
NUP98P52948 RNU6-28P-201ENST00000362378 107 ntBASIC1.11□□□□□ -2.23
NUP98P52948 RNU6-353P-201ENST00000364266 108 ntBASIC1.11□□□□□ -2.23
NUP98P52948 Y_RNA.548-201ENST00000384656 105 ntBASIC1.11□□□□□ -2.23
NUP98P52948 RPL21P90-201ENST00000415692 466 ntBASIC1.11□□□□□ -2.23
NUP98P52948 AL691517.1-201ENST00000440833 1235 ntBASIC1.11□□□□□ -2.23
NUP98P52948 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.11□□□□□ -2.23
NUP98P52948 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.11□□□□□ -2.23
NUP98P52948 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.11□□□□□ -2.23
NUP98P52948 AC005951.2-201ENST00000576282 495 ntBASIC1.11□□□□□ -2.23
NUP98P52948 AL713866.2-201ENST00000603579 219 ntBASIC1.11□□□□□ -2.23
NUP98P52948 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
NUP98P52948 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.11□□□□□ -2.23
NUP98P52948 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
NUP98P52948 Y_RNA.374-201ENST00000365606 101 ntBASIC1.1□□□□□ -2.23
NUP98P52948 RNU6-637P-201ENST00000384050 107 ntBASIC1.1□□□□□ -2.23
NUP98P52948 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
NUP98P52948 AC127391.1-201ENST00000411737 98 ntBASIC1.1□□□□□ -2.23
NUP98P52948 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.1□□□□□ -2.23
NUP98P52948 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.1□□□□□ -2.23
NUP98P52948 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.1□□□□□ -2.23
NUP98P52948 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
NUP98P52948 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.1□□□□□ -2.23
NUP98P52948 SNORA44.1-201ENST00000517031 108 ntBASIC1.1□□□□□ -2.23
NUP98P52948 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.1□□□□□ -2.23
NUP98P52948 MIR4789-201ENST00000577469 82 ntBASIC1.1□□□□□ -2.23
NUP98P52948 SNRPGP17-201ENST00000603780 214 ntBASIC1.1□□□□□ -2.23
NUP98P52948 AL603758.1-201ENST00000618654 241 ntBASIC1.1□□□□□ -2.23
NUP98P52948 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
NUP98P52948 RNU6-432P-201ENST00000384196 109 ntBASIC1.1□□□□□ -2.23
NUP98P52948 RNU6-549P-201ENST00000384433 107 ntBASIC1.1□□□□□ -2.23
NUP98P52948 SNORA8-201ENST00000384574 139 ntBASIC1.1□□□□□ -2.23
NUP98P52948 RNU6-1300P-201ENST00000391046 108 ntBASIC1.1□□□□□ -2.23
NUP98P52948 RPL26P27-201ENST00000414397 437 ntBASIC1.1□□□□□ -2.23
NUP98P52948 AC004941.2-201ENST00000427009 228 ntBASIC1.1□□□□□ -2.23
NUP98P52948 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.1□□□□□ -2.23
NUP98P52948 MTND4P6-201ENST00000438297 472 ntBASIC1.1□□□□□ -2.23
NUP98P52948 MTND4LP16-201ENST00000440828 295 ntBASIC1.1□□□□□ -2.23
NUP98P52948 RNU6-581P-201ENST00000516214 105 ntBASIC1.1□□□□□ -2.23
NUP98P52948 RNU6-362P-201ENST00000516736 90 ntBASIC1.1□□□□□ -2.23
NUP98P52948 AC022861.1-201ENST00000522981 663 ntBASIC1.1□□□□□ -2.23
NUP98P52948 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.1□□□□□ -2.23
NUP98P52948 ELOCP5-201ENST00000604924 333 ntBASIC1.1□□□□□ -2.23
NUP98P52948 RNU6-91P-201ENST00000607774 107 ntBASIC1.1□□□□□ -2.23
NUP98P52948 AP005229.2-201ENST00000609980 697 ntBASIC1.1□□□□□ -2.23
NUP98P52948 AC084824.4-201ENST00000620106 731 ntBASIC1.1□□□□□ -2.23
NUP98P52948 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.1□□□□□ -2.23
NUP98P52948 AC018630.2-201ENST00000534866 2403 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms