Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLCN3P51790 HIF1AP1-201ENST00000553642 175 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCN3P51790 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLCN3P51790 AC004805.2-201ENST00000605382 482 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 AC008945.2-201ENST00000606056 604 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCN3P51790 DUSP12P1-201ENST00000612874 516 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 AC130324.3-201ENST00000614165 542 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 AC073308.1-201ENST00000623696 305 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCN3P51790 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLCN3P51790 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLCN3P51790 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLCN3P51790 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLCN3P51790 MAPK10-322ENST00000641485 4530 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLCN3P51790 CBX3P1-201ENST00000325243 554 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 RNU1-35P-201ENST00000362782 153 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 SNORA62.1-201ENST00000364287 154 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 SNORA14A-201ENST00000364773 135 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 RNU6-876P-201ENST00000391295 104 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 AL138827.1-201ENST00000402666 306 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 RNU2-52P-201ENST00000410680 190 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 RNA5SP184-201ENST00000411071 108 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.09□□□□□ -1.91
CLCN3P51790 AC092809.3-201ENST00000415453 231 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 NUP35P1-201ENST00000422734 947 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 AL592045.1-201ENST00000429867 352 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 HIGD1AP11-201ENST00000438361 280 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 MTND4LP16-201ENST00000440828 295 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 USP9YP8-201ENST00000441913 500 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.09□□□□□ -1.91
CLCN3P51790 CECR9-201ENST00000453421 199 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 AC010099.1-201ENST00000455434 375 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 SNORD109B-201ENST00000458961 67 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 RNU7-63P-201ENST00000459054 62 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 SNORD109A-201ENST00000459128 67 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.09□□□□□ -1.91
CLCN3P51790 AL163973.1-201ENST00000484753 577 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 HMGN1P12-201ENST00000499125 195 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.09□□□□□ -1.91
CLCN3P51790 AC018710.1-201ENST00000506509 158 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 RNU6-507P-201ENST00000516045 100 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 RN7SKP43-201ENST00000516173 320 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 RNU6-875P-201ENST00000516488 106 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 RNU6-928P-201ENST00000516876 104 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 RNA5SP165-201ENST00000517142 115 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 SUB1P1-201ENST00000524415 382 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 AP003122.3-201ENST00000526316 255 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 AC084851.1-201ENST00000529105 249 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 OR5AL2P-201ENST00000532185 920 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 AP000867.2-201ENST00000532468 320 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.09□□□□□ -1.91
CLCN3P51790 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.09□□□□□ -1.91
CLCN3P51790 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.09□□□□□ -1.91
CLCN3P51790 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
CLCN3P51790 AC005730.3-201ENST00000583067 366 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 AL117336.2-201ENST00000602435 335 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 NRBF2P5-201ENST00000603087 788 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 DISC2.1-201ENST00000612827 205 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 AC104260.1-201ENST00000616660 539 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.09□□□□□ -1.91
CLCN3P51790 AC011155.2-201ENST00000623202 216 ntBASIC3.09□□□□□ -1.91
CLCN3P51790 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.09□□□□□ -1.91
CLCN3P51790 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.09□□□□□ -1.91
CLCN3P51790 AC092593.1-201ENST00000515413 1815 ntBASIC3.09□□□□□ -1.92
CLCN3P51790 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.08□□□□□ -1.92
CLCN3P51790 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.08□□□□□ -1.92
CLCN3P51790 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLCN3P51790 Y_RNA.160-201ENST00000363677 92 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 RNU6-996P-201ENST00000365438 107 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 Y_RNA.576-201ENST00000384781 102 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 MIR512-1-201ENST00000384913 84 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 MIR514A2-201ENST00000385131 88 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 MIR514A3-201ENST00000385132 88 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CLCN3P51790 AL360182.1-201ENST00000397433 468 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 AL591416.1-201ENST00000404015 867 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.08□□□□□ -1.92
CLCN3P51790 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.08□□□□□ -1.92
CLCN3P51790 AC099548.1-201ENST00000421443 426 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.08□□□□□ -1.92
CLCN3P51790 AC009969.1-201ENST00000438726 172 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 AL109933.2-201ENST00000452651 260 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.08□□□□□ -1.92
CLCN3P51790 RPL38P4-201ENST00000502376 214 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 AC117522.3-201ENST00000507974 584 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 RNA5SP401-201ENST00000515920 127 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 RNU6-123P-201ENST00000516163 102 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 SNORD60.2-201ENST00000516883 86 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 RNA5SP503-201ENST00000517047 117 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 RNU6-1315P-201ENST00000517187 99 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 IGHV3-76-201ENST00000522465 295 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.08□□□□□ -1.92
CLCN3P51790 MIR3162-201ENST00000581818 82 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.08□□□□□ -1.92
CLCN3P51790 MIR4424-201ENST00000585257 86 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 UBE2V2P2-201ENST00000587677 504 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms