Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.75□□□□□ -1.97
SLC6A12P48065 AC108078.2-201ENST00000510750 236 ntBASIC2.75□□□□□ -1.97
SLC6A12P48065 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.75□□□□□ -1.97
SLC6A12P48065 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.75□□□□□ -1.97
SLC6A12P48065 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.75□□□□□ -1.97
SLC6A12P48065 MIR4703-201ENST00000577728 79 ntBASIC2.75□□□□□ -1.97
SLC6A12P48065 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.75□□□□□ -1.97
SLC6A12P48065 AC008945.2-201ENST00000606056 604 ntBASIC2.75□□□□□ -1.97
SLC6A12P48065 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.75□□□□□ -1.97
SLC6A12P48065 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.75□□□□□ -1.97
SLC6A12P48065 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SLC6A12P48065 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
SLC6A12P48065 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.75□□□□□ -1.97
SLC6A12P48065 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SLC6A12P48065 AC092593.1-201ENST00000515413 1815 ntBASIC2.75□□□□□ -1.97
SLC6A12P48065 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SLC6A12P48065 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SLC6A12P48065 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SLC6A12P48065 RNU6-552P-201ENST00000362869 119 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 RNU6-179P-201ENST00000363350 107 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 RNU6-884P-201ENST00000363889 107 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 RNU4-20P-201ENST00000365601 151 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
SLC6A12P48065 DYNLT3P1-201ENST00000378574 347 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 RNU6-877P-201ENST00000383868 107 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 MIR888-201ENST00000401186 77 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 AC092809.3-201ENST00000415453 231 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC6A12P48065 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC6A12P48065 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC6A12P48065 RPL35AP12-201ENST00000425362 338 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 AL358075.3-201ENST00000426289 226 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 RPL36AP53-201ENST00000432891 316 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 AL513043.1-201ENST00000439124 535 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 UBBP3-201ENST00000445497 241 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 RPS15AP27-201ENST00000449183 343 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 MTCYBP18-201ENST00000501056 747 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 MTCO3P9-201ENST00000506989 781 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 AC117522.3-201ENST00000507974 584 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 RBBP4P6-201ENST00000508098 202 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.74□□□□□ -1.97
SLC6A12P48065 AC105417.1-201ENST00000514691 285 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.74□□□□□ -1.97
SLC6A12P48065 RNU6-685P-201ENST00000517088 95 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 RNA5SP290-201ENST00000517133 127 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 AP000889.1-201ENST00000530968 660 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 HIF1AP1-201ENST00000553642 175 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.74□□□□□ -1.97
SLC6A12P48065 AC106782.4-201ENST00000568264 210 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 MIR4424-201ENST00000585257 86 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 AC008521.1-201ENST00000587471 187 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC6A12P48065 AC024153.1-201ENST00000603103 365 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 AC019159.1-201ENST00000605094 187 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 MTND4LP5-201ENST00000605152 292 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 AC022306.2-201ENST00000617563 647 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 FRG1KP-201ENST00000623592 341 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 MTND5P7-201ENST00000413558 1798 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 CASC19-280ENST00000642102 1351 ntBASIC2.74□□□□□ -1.97
SLC6A12P48065 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SLC6A12P48065 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
SLC6A12P48065 AC138393.2-201ENST00000414742 246 ntBASIC2.73□□□□□ -1.97
SLC6A12P48065 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.73□□□□□ -1.97
SLC6A12P48065 AL139413.1-201ENST00000421309 217 ntBASIC2.73□□□□□ -1.97
SLC6A12P48065 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.73□□□□□ -1.97
SLC6A12P48065 AC022018.1-201ENST00000430685 241 ntBASIC2.73□□□□□ -1.97
SLC6A12P48065 CALM1P1-201ENST00000442082 433 ntBASIC2.73□□□□□ -1.97
SLC6A12P48065 NEFMP1-201ENST00000443423 1006 ntBASIC2.73□□□□□ -1.97
SLC6A12P48065 RPL39P36-201ENST00000490784 156 ntBASIC2.73□□□□□ -1.97
SLC6A12P48065 EIF4EP3-201ENST00000498782 656 ntBASIC2.73□□□□□ -1.97
SLC6A12P48065 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC6A12P48065 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.73□□□□□ -1.97
SLC6A12P48065 SNORA20.3-201ENST00000516880 132 ntBASIC2.73□□□□□ -1.97
SLC6A12P48065 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC6A12P48065 HPRT1P3-201ENST00000539521 576 ntBASIC2.73□□□□□ -1.97
SLC6A12P48065 AC025281.1-201ENST00000567026 265 ntBASIC2.73□□□□□ -1.97
SLC6A12P48065 AL451007.1-201ENST00000595491 289 ntBASIC2.73□□□□□ -1.97
SLC6A12P48065 AL355877.2-201ENST00000603670 358 ntBASIC2.73□□□□□ -1.97
SLC6A12P48065 AL365204.3-201ENST00000612448 685 ntBASIC2.73□□□□□ -1.97
SLC6A12P48065 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.73□□□□□ -1.97
SLC6A12P48065 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
SLC6A12P48065 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC6A12P48065 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SLC6A12P48065 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SLC6A12P48065 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SLC6A12P48065 ASNSP3-201ENST00000451989 1306 ntBASIC2.72□□□□□ -1.97
SLC6A12P48065 AC103710.2-202ENST00000641454 2853 ntBASIC2.72□□□□□ -1.97
SLC6A12P48065 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
SLC6A12P48065 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SLC6A12P48065 Y_RNA.245-201ENST00000364493 95 ntBASIC2.72□□□□□ -1.97
SLC6A12P48065 SNORA44-201ENST00000384584 132 ntBASIC2.72□□□□□ -1.97
SLC6A12P48065 MIR514A2-201ENST00000385131 88 ntBASIC2.72□□□□□ -1.97
SLC6A12P48065 MIR514A3-201ENST00000385132 88 ntBASIC2.72□□□□□ -1.97
SLC6A12P48065 MT-TL1-201ENST00000386347 75 ntBASIC2.72□□□□□ -1.97
SLC6A12P48065 AC022028.1-201ENST00000412054 408 ntBASIC2.72□□□□□ -1.97
SLC6A12P48065 EEF1A1P41-201ENST00000414667 207 ntBASIC2.72□□□□□ -1.97
SLC6A12P48065 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.72□□□□□ -1.97
SLC6A12P48065 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.72□□□□□ -1.97
SLC6A12P48065 SNRPEP9-201ENST00000436794 238 ntBASIC2.72□□□□□ -1.97
SLC6A12P48065 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms