Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 MIR934-201ENST00000401241 83 ntBASIC1.12□□□□□ -2.23
RPL28P46779 MIR1262-201ENST00000408276 93 ntBASIC1.12□□□□□ -2.23
RPL28P46779 POLHP1-201ENST00000411806 470 ntBASIC1.12□□□□□ -2.23
RPL28P46779 RPS12P24-201ENST00000412619 387 ntBASIC1.12□□□□□ -2.23
RPL28P46779 AC009310.1-201ENST00000414414 451 ntBASIC1.12□□□□□ -2.23
RPL28P46779 VN1R36P-201ENST00000414936 291 ntBASIC1.12□□□□□ -2.23
RPL28P46779 AL022400.1-201ENST00000423946 935 ntBASIC1.12□□□□□ -2.23
RPL28P46779 HMGN2P3-201ENST00000433603 273 ntBASIC1.12□□□□□ -2.23
RPL28P46779 HMGN2P5-201ENST00000436882 273 ntBASIC1.12□□□□□ -2.23
RPL28P46779 HMGB3P12-201ENST00000438745 556 ntBASIC1.12□□□□□ -2.23
RPL28P46779 NEFMP1-201ENST00000443423 1006 ntBASIC1.12□□□□□ -2.23
RPL28P46779 AL078601.1-201ENST00000444542 271 ntBASIC1.12□□□□□ -2.23
RPL28P46779 AC007327.1-201ENST00000447461 264 ntBASIC1.12□□□□□ -2.23
RPL28P46779 AC007182.2-201ENST00000489251 402 ntBASIC1.12□□□□□ -2.23
RPL28P46779 AC096745.1-201ENST00000509945 370 ntBASIC1.12□□□□□ -2.23
RPL28P46779 RNA5SP216-201ENST00000516111 123 ntBASIC1.12□□□□□ -2.23
RPL28P46779 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.12□□□□□ -2.23
RPL28P46779 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.12□□□□□ -2.23
RPL28P46779 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.12□□□□□ -2.23
RPL28P46779 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.12□□□□□ -2.23
RPL28P46779 AC009712.1-201ENST00000564938 316 ntBASIC1.12□□□□□ -2.23
RPL28P46779 AC093249.1-201ENST00000567049 203 ntBASIC1.12□□□□□ -2.23
RPL28P46779 AC104581.2-201ENST00000572227 430 ntBASIC1.12□□□□□ -2.23
RPL28P46779 CLIC4P2-201ENST00000601934 717 ntBASIC1.12□□□□□ -2.23
RPL28P46779 AC007363.1-201ENST00000604736 620 ntBASIC1.12□□□□□ -2.23
RPL28P46779 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.12□□□□□ -2.23
RPL28P46779 AC103710.2-201ENST00000609912 942 ntBASIC1.12□□□□□ -2.23
RPL28P46779 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.12□□□□□ -2.23
RPL28P46779 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.12□□□□□ -2.23
RPL28P46779 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.11□□□□□ -2.23
RPL28P46779 RNU6-1010P-201ENST00000362757 107 ntBASIC1.11□□□□□ -2.23
RPL28P46779 RNU6-288P-201ENST00000363690 104 ntBASIC1.11□□□□□ -2.23
RPL28P46779 RNU6-413P-201ENST00000384115 107 ntBASIC1.11□□□□□ -2.23
RPL28P46779 RNU6-166P-201ENST00000384371 107 ntBASIC1.11□□□□□ -2.23
RPL28P46779 Y_RNA.534-201ENST00000384599 112 ntBASIC1.11□□□□□ -2.23
RPL28P46779 RNU6-1257P-201ENST00000384625 110 ntBASIC1.11□□□□□ -2.23
RPL28P46779 RNU4-26P-201ENST00000410270 107 ntBASIC1.11□□□□□ -2.23
RPL28P46779 BX510359.4-201ENST00000423750 193 ntBASIC1.11□□□□□ -2.23
RPL28P46779 UBE2V1P4-201ENST00000425374 344 ntBASIC1.11□□□□□ -2.23
RPL28P46779 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.11□□□□□ -2.23
RPL28P46779 AL591704.1-201ENST00000432574 275 ntBASIC1.11□□□□□ -2.23
RPL28P46779 USP9YP15-201ENST00000442391 422 ntBASIC1.11□□□□□ -2.23
RPL28P46779 AL360221.1-201ENST00000445989 335 ntBASIC1.11□□□□□ -2.23
RPL28P46779 AL513124.1-201ENST00000450410 614 ntBASIC1.11□□□□□ -2.23
RPL28P46779 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.11□□□□□ -2.23
RPL28P46779 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.11□□□□□ -2.23
RPL28P46779 AC027575.1-201ENST00000481064 460 ntBASIC1.11□□□□□ -2.23
RPL28P46779 AC104564.1-201ENST00000493028 407 ntBASIC1.11□□□□□ -2.23
RPL28P46779 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.11□□□□□ -2.23
RPL28P46779 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.11□□□□□ -2.23
RPL28P46779 AC109329.1-201ENST00000518744 317 ntBASIC1.11□□□□□ -2.23
RPL28P46779 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.11□□□□□ -2.23
RPL28P46779 MTND1P36-201ENST00000522384 936 ntBASIC1.11□□□□□ -2.23
RPL28P46779 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.11□□□□□ -2.23
RPL28P46779 AP000763.2-201ENST00000540641 163 ntBASIC1.11□□□□□ -2.23
RPL28P46779 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.11□□□□□ -2.23
RPL28P46779 MTND4LP25-201ENST00000570218 163 ntBASIC1.11□□□□□ -2.23
RPL28P46779 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.11□□□□□ -2.23
RPL28P46779 AC073410.2-201ENST00000603240 332 ntBASIC1.11□□□□□ -2.23
RPL28P46779 AP001981.2-201ENST00000603241 418 ntBASIC1.11□□□□□ -2.23
RPL28P46779 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.11□□□□□ -2.23
RPL28P46779 AL132822.1-201ENST00000617063 513 ntBASIC1.11□□□□□ -2.23
RPL28P46779 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.11□□□□□ -2.23
RPL28P46779 AC099654.8-201ENST00000637757 681 ntBASIC1.11□□□□□ -2.23
RPL28P46779 AC092125.1-201ENST00000562568 1995 ntBASIC1.1□□□□□ -2.23
RPL28P46779 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.1□□□□□ -2.23
RPL28P46779 SNORD115-3-201ENST00000363100 82 ntBASIC1.1□□□□□ -2.23
RPL28P46779 RNA5SP126-201ENST00000365092 109 ntBASIC1.1□□□□□ -2.23
RPL28P46779 RNU6-611P-201ENST00000384276 104 ntBASIC1.1□□□□□ -2.23
RPL28P46779 MIR301A-201ENST00000385261 86 ntBASIC1.1□□□□□ -2.23
RPL28P46779 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
RPL28P46779 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
RPL28P46779 RNU6-278P-201ENST00000390945 109 ntBASIC1.1□□□□□ -2.23
RPL28P46779 RNU2-2P-201ENST00000410396 191 ntBASIC1.1□□□□□ -2.23
RPL28P46779 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.1□□□□□ -2.23
RPL28P46779 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.1□□□□□ -2.23
RPL28P46779 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.1□□□□□ -2.23
RPL28P46779 AP000949.1-201ENST00000438328 629 ntBASIC1.1□□□□□ -2.23
RPL28P46779 MTND4P25-201ENST00000441039 533 ntBASIC1.1□□□□□ -2.23
RPL28P46779 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.1□□□□□ -2.23
RPL28P46779 AC108059.3-201ENST00000456388 214 ntBASIC1.1□□□□□ -2.23
RPL28P46779 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.1□□□□□ -2.23
RPL28P46779 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.1□□□□□ -2.23
RPL28P46779 RNU2-53P-201ENST00000516257 147 ntBASIC1.1□□□□□ -2.23
RPL28P46779 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.1□□□□□ -2.23
RPL28P46779 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.1□□□□□ -2.23
RPL28P46779 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.1□□□□□ -2.23
RPL28P46779 MIR3198-2-201ENST00000577868 80 ntBASIC1.1□□□□□ -2.23
RPL28P46779 AL606834.3-201ENST00000602615 496 ntBASIC1.1□□□□□ -2.23
RPL28P46779 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.1□□□□□ -2.23
RPL28P46779 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.1□□□□□ -2.23
RPL28P46779 U2.15-201ENST00000611544 191 ntBASIC1.1□□□□□ -2.23
RPL28P46779 U2.16-201ENST00000613119 191 ntBASIC1.1□□□□□ -2.23
RPL28P46779 U2.12-201ENST00000613778 191 ntBASIC1.1□□□□□ -2.23
RPL28P46779 U2.20-201ENST00000613956 192 ntBASIC1.1□□□□□ -2.23
RPL28P46779 U2.9-201ENST00000615427 191 ntBASIC1.1□□□□□ -2.23
RPL28P46779 U2.11-201ENST00000616345 191 ntBASIC1.1□□□□□ -2.23
RPL28P46779 U2.2-201ENST00000616535 191 ntBASIC1.1□□□□□ -2.23
RPL28P46779 U2.3-201ENST00000617785 191 ntBASIC1.1□□□□□ -2.23
RPL28P46779 U2.19-201ENST00000618602 191 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms