Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MTCYBP36-201ENST00000404146 440 ntBASIC2.11□□□□□ -2.07
SSR1P43307 RPS20P15-201ENST00000412792 311 ntBASIC2.11□□□□□ -2.07
SSR1P43307 EDDM3CP-201ENST00000415977 425 ntBASIC2.11□□□□□ -2.07
SSR1P43307 AC016831.2-201ENST00000417179 352 ntBASIC2.11□□□□□ -2.07
SSR1P43307 AC013410.2-201ENST00000422627 201 ntBASIC2.11□□□□□ -2.07
SSR1P43307 AC007283.2-201ENST00000424739 197 ntBASIC2.11□□□□□ -2.07
SSR1P43307 AC118469.1-201ENST00000442943 488 ntBASIC2.11□□□□□ -2.07
SSR1P43307 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.11□□□□□ -2.07
SSR1P43307 SSXP1-201ENST00000453640 473 ntBASIC2.11□□□□□ -2.07
SSR1P43307 UBE2DNL-203ENST00000474922 222 ntBASIC2.11□□□□□ -2.07
SSR1P43307 RPL9P6-201ENST00000492764 598 ntBASIC2.11□□□□□ -2.07
SSR1P43307 AC022616.6-201ENST00000520479 119 ntBASIC2.11□□□□□ -2.07
SSR1P43307 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.11□□□□□ -2.07
SSR1P43307 MRPS36P5-201ENST00000551909 298 ntBASIC2.11□□□□□ -2.07
SSR1P43307 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.11□□□□□ -2.07
SSR1P43307 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.11□□□□□ -2.07
SSR1P43307 SNRPGP19-201ENST00000603826 189 ntBASIC2.11□□□□□ -2.07
SSR1P43307 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.11□□□□□ -2.07
SSR1P43307 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SSR1P43307 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SSR1P43307 SNORD3E-201ENST00000362899 217 ntBASIC2.1□□□□□ -2.07
SSR1P43307 RNU6-946P-201ENST00000383878 107 ntBASIC2.1□□□□□ -2.07
SSR1P43307 Y_RNA.534-201ENST00000384599 112 ntBASIC2.1□□□□□ -2.07
SSR1P43307 MIR518D-201ENST00000385014 87 ntBASIC2.1□□□□□ -2.07
SSR1P43307 RNA5SP425-201ENST00000410336 112 ntBASIC2.1□□□□□ -2.07
SSR1P43307 RNU6-1025P-201ENST00000410629 104 ntBASIC2.1□□□□□ -2.07
SSR1P43307 RPS3AP44-201ENST00000425466 790 ntBASIC2.1□□□□□ -2.07
SSR1P43307 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.1□□□□□ -2.07
SSR1P43307 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.1□□□□□ -2.07
SSR1P43307 HSPE1P21-201ENST00000438283 308 ntBASIC2.1□□□□□ -2.07
SSR1P43307 AL354941.1-201ENST00000438600 464 ntBASIC2.1□□□□□ -2.07
SSR1P43307 RPL22P17-201ENST00000438729 315 ntBASIC2.1□□□□□ -2.07
SSR1P43307 RPL7P12-201ENST00000446719 750 ntBASIC2.1□□□□□ -2.07
SSR1P43307 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.1□□□□□ -2.07
SSR1P43307 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.1□□□□□ -2.07
SSR1P43307 snoU109.2-201ENST00000459316 135 ntBASIC2.1□□□□□ -2.07
SSR1P43307 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.1□□□□□ -2.07
SSR1P43307 AC023194.1-201ENST00000493084 308 ntBASIC2.1□□□□□ -2.07
SSR1P43307 AF213884.2-201ENST00000510417 903 ntBASIC2.1□□□□□ -2.07
SSR1P43307 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.1□□□□□ -2.07
SSR1P43307 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.1□□□□□ -2.07
SSR1P43307 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.1□□□□□ -2.07
SSR1P43307 Y_RNA.689-201ENST00000516589 107 ntBASIC2.1□□□□□ -2.07
SSR1P43307 RNU6-143P-201ENST00000516942 93 ntBASIC2.1□□□□□ -2.07
SSR1P43307 IGKV3-31-201ENST00000523109 329 ntBASIC2.1□□□□□ -2.07
SSR1P43307 MTND4LP18-201ENST00000526864 291 ntBASIC2.1□□□□□ -2.07
SSR1P43307 AP003181.2-201ENST00000528941 181 ntBASIC2.1□□□□□ -2.07
SSR1P43307 CBX3P4-201ENST00000538909 354 ntBASIC2.1□□□□□ -2.07
SSR1P43307 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.1□□□□□ -2.07
SSR1P43307 MIR1273D-201ENST00000577266 86 ntBASIC2.1□□□□□ -2.07
SSR1P43307 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.1□□□□□ -2.07
SSR1P43307 AP001004.1-201ENST00000582468 324 ntBASIC2.1□□□□□ -2.07
SSR1P43307 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.1□□□□□ -2.07
SSR1P43307 AC245884.10-201ENST00000597355 337 ntBASIC2.1□□□□□ -2.07
SSR1P43307 MIR15A-201ENST00000607334 83 ntBASIC2.1□□□□□ -2.07
SSR1P43307 uc_338.12-201ENST00000616344 181 ntBASIC2.1□□□□□ -2.07
SSR1P43307 MIR6134-201ENST00000617606 109 ntBASIC2.1□□□□□ -2.07
SSR1P43307 CDC27P3-201ENST00000635418 1910 ntBASIC2.09□□□□□ -2.07
SSR1P43307 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.09□□□□□ -2.07
SSR1P43307 MTND5P30-201ENST00000452896 1731 ntBASIC2.09□□□□□ -2.07
SSR1P43307 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SSR1P43307 SNORD113-6-201ENST00000363345 75 ntBASIC2.09□□□□□ -2.07
SSR1P43307 RNU5E-6P-201ENST00000365574 115 ntBASIC2.09□□□□□ -2.07
SSR1P43307 FTH1P15-201ENST00000406984 280 ntBASIC2.09□□□□□ -2.07
SSR1P43307 AL158823.1-201ENST00000418441 478 ntBASIC2.09□□□□□ -2.07
SSR1P43307 EIF1AXP1-201ENST00000419267 435 ntBASIC2.09□□□□□ -2.07
SSR1P43307 DPH3P2-201ENST00000422618 250 ntBASIC2.09□□□□□ -2.07
SSR1P43307 AC011233.1-201ENST00000422812 283 ntBASIC2.09□□□□□ -2.07
SSR1P43307 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.09□□□□□ -2.07
SSR1P43307 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.09□□□□□ -2.07
SSR1P43307 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.09□□□□□ -2.07
SSR1P43307 BRK1P2-201ENST00000442875 223 ntBASIC2.09□□□□□ -2.07
SSR1P43307 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.09□□□□□ -2.07
SSR1P43307 AC096638.1-201ENST00000444678 216 ntBASIC2.09□□□□□ -2.07
SSR1P43307 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.09□□□□□ -2.07
SSR1P43307 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.09□□□□□ -2.07
SSR1P43307 AC068587.2-201ENST00000478386 781 ntBASIC2.09□□□□□ -2.07
SSR1P43307 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.09□□□□□ -2.07
SSR1P43307 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.09□□□□□ -2.07
SSR1P43307 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.09□□□□□ -2.07
SSR1P43307 RPS3AP4-201ENST00000555161 764 ntBASIC2.09□□□□□ -2.07
SSR1P43307 DEFB122-202ENST00000569013 197 ntBASIC2.09□□□□□ -2.07
SSR1P43307 TUSC7.1-201ENST00000610969 165 ntBASIC2.09□□□□□ -2.07
SSR1P43307 AL773524.1-201ENST00000614065 229 ntBASIC2.09□□□□□ -2.07
SSR1P43307 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.09□□□□□ -2.07
SSR1P43307 AC024581.2-201ENST00000619986 252 ntBASIC2.09□□□□□ -2.07
SSR1P43307 AP002782.1-201ENST00000623107 614 ntBASIC2.09□□□□□ -2.07
SSR1P43307 AC064859.1-201ENST00000624741 174 ntBASIC2.09□□□□□ -2.07
SSR1P43307 AC010149.2-201ENST00000637608 315 ntBASIC2.09□□□□□ -2.07
SSR1P43307 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SSR1P43307 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.09□□□□□ -2.08
SSR1P43307 RNU6-486P-201ENST00000363116 107 ntBASIC2.08□□□□□ -2.08
SSR1P43307 Y_RNA.111-201ENST00000363248 100 ntBASIC2.08□□□□□ -2.08
SSR1P43307 RNU6-166P-201ENST00000384371 107 ntBASIC2.08□□□□□ -2.08
SSR1P43307 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SSR1P43307 AL591034.2-201ENST00000402839 359 ntBASIC2.08□□□□□ -2.08
SSR1P43307 U6atac.2-201ENST00000408644 118 ntBASIC2.08□□□□□ -2.08
SSR1P43307 USP9YP6-201ENST00000413550 854 ntBASIC2.08□□□□□ -2.08
SSR1P43307 AC097463.2-201ENST00000421074 142 ntBASIC2.08□□□□□ -2.08
SSR1P43307 PGBD4P6-201ENST00000421501 610 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms