Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL590282.1-201ENST00000610379 1136 ntBASIC0.14□□□□□ -2.39
HTTP42858 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.14□□□□□ -2.39
HTTP42858 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.14□□□□□ -2.39
HTTP42858 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
HTTP42858 AL355615.1-201ENST00000406187 641 ntBASIC0.13□□□□□ -2.39
HTTP42858 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.13□□□□□ -2.39
HTTP42858 CYP2C59P-201ENST00000457790 269 ntBASIC0.13□□□□□ -2.39
HTTP42858 RNU6-775P-201ENST00000459318 96 ntBASIC0.13□□□□□ -2.39
HTTP42858 AC107626.1-201ENST00000471084 183 ntBASIC0.13□□□□□ -2.39
HTTP42858 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.13□□□□□ -2.39
HTTP42858 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.13□□□□□ -2.39
HTTP42858 AL021997.1-201ENST00000605757 193 ntBASIC0.13□□□□□ -2.39
HTTP42858 uc_338.6-201ENST00000613544 171 ntBASIC0.13□□□□□ -2.39
HTTP42858 AL078604.3-201ENST00000615580 211 ntBASIC0.13□□□□□ -2.39
HTTP42858 SNORD49B-201ENST00000365172 72 ntBASIC0.13□□□□□ -2.39
HTTP42858 MT-TP-201ENST00000387461 68 ntBASIC0.13□□□□□ -2.39
HTTP42858 SNORA40.19-201ENST00000390846 128 ntBASIC0.13□□□□□ -2.39
HTTP42858 AL109913.1-201ENST00000421173 514 ntBASIC0.13□□□□□ -2.39
HTTP42858 AC023347.2-201ENST00000433994 462 ntBASIC0.13□□□□□ -2.39
HTTP42858 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.13□□□□□ -2.39
HTTP42858 ARPC3P5-201ENST00000448802 534 ntBASIC0.13□□□□□ -2.39
HTTP42858 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.13□□□□□ -2.39
HTTP42858 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.13□□□□□ -2.39
HTTP42858 RPS26P55-201ENST00000471178 356 ntBASIC0.13□□□□□ -2.39
HTTP42858 RPL21P47-201ENST00000483696 477 ntBASIC0.13□□□□□ -2.39
HTTP42858 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.13□□□□□ -2.39
HTTP42858 RNA5SP404-201ENST00000517118 132 ntBASIC0.13□□□□□ -2.39
HTTP42858 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.13□□□□□ -2.39
HTTP42858 OR8K4P-201ENST00000534608 872 ntBASIC0.13□□□□□ -2.39
HTTP42858 AP003400.5-201ENST00000624827 617 ntBASIC0.13□□□□□ -2.39
HTTP42858 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.13□□□□□ -2.39
HTTP42858 ZNF680P1-201ENST00000436625 1469 ntBASIC0.13□□□□□ -2.39
HTTP42858 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.13□□□□□ -2.39
HTTP42858 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.13□□□□□ -2.39
HTTP42858 AL365496.1-201ENST00000426885 215 ntBASIC0.13□□□□□ -2.39
HTTP42858 RPL36AP53-201ENST00000432891 316 ntBASIC0.13□□□□□ -2.39
HTTP42858 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
HTTP42858 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.13□□□□□ -2.39
HTTP42858 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.13□□□□□ -2.39
HTTP42858 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
HTTP42858 ACA64.5-201ENST00000516207 127 ntBASIC0.13□□□□□ -2.39
HTTP42858 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.13□□□□□ -2.39
HTTP42858 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
HTTP42858 MIR4661-201ENST00000582720 75 ntBASIC0.13□□□□□ -2.39
HTTP42858 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
HTTP42858 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
HTTP42858 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.12□□□□□ -2.39
HTTP42858 U8.7-201ENST00000364940 136 ntBASIC0.12□□□□□ -2.39
HTTP42858 MIR767-201ENST00000390228 109 ntBASIC0.12□□□□□ -2.39
HTTP42858 SSR1P1-201ENST00000407630 814 ntBASIC0.12□□□□□ -2.39
HTTP42858 AL359704.1-201ENST00000411586 781 ntBASIC0.12□□□□□ -2.39
HTTP42858 NCOR1P3-201ENST00000420479 303 ntBASIC0.12□□□□□ -2.39
HTTP42858 PIGFP2-201ENST00000421400 651 ntBASIC0.12□□□□□ -2.39
HTTP42858 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.12□□□□□ -2.39
HTTP42858 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.12□□□□□ -2.39
HTTP42858 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.12□□□□□ -2.39
HTTP42858 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
HTTP42858 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.12□□□□□ -2.39
HTTP42858 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.12□□□□□ -2.39
HTTP42858 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.12□□□□□ -2.39
HTTP42858 AC021171.1-201ENST00000603137 706 ntBASIC0.12□□□□□ -2.39
HTTP42858 RNU6-654P-201ENST00000364373 107 ntBASIC0.12□□□□□ -2.39
HTTP42858 RNU6-968P-201ENST00000384076 107 ntBASIC0.12□□□□□ -2.39
HTTP42858 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.12□□□□□ -2.39
HTTP42858 EIF4EP2-201ENST00000422816 654 ntBASIC0.12□□□□□ -2.39
HTTP42858 AC244023.1-201ENST00000426884 112 ntBASIC0.12□□□□□ -2.39
HTTP42858 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.12□□□□□ -2.39
HTTP42858 RNU6-889P-201ENST00000517189 103 ntBASIC0.12□□□□□ -2.39
HTTP42858 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.12□□□□□ -2.39
HTTP42858 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.12□□□□□ -2.39
HTTP42858 AC012414.6-201ENST00000568241 401 ntBASIC0.12□□□□□ -2.39
HTTP42858 HMGN2P15-201ENST00000585707 270 ntBASIC0.12□□□□□ -2.39
HTTP42858 AC092474.3-201ENST00000603022 568 ntBASIC0.12□□□□□ -2.39
HTTP42858 AC004987.4-201ENST00000603383 338 ntBASIC0.12□□□□□ -2.39
HTTP42858 AC242498.1-201ENST00000604134 111 ntBASIC0.12□□□□□ -2.39
HTTP42858 AL355810.1-201ENST00000614629 552 ntBASIC0.12□□□□□ -2.39
HTTP42858 AC243994.1-201ENST00000618627 109 ntBASIC0.12□□□□□ -2.39
HTTP42858 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.12□□□□□ -2.39
HTTP42858 MIR411-201ENST00000362239 96 ntBASIC0.11□□□□□ -2.39
HTTP42858 SNORA68.1-201ENST00000364537 132 ntBASIC0.11□□□□□ -2.39
HTTP42858 RNU1-36P-201ENST00000365130 165 ntBASIC0.11□□□□□ -2.39
HTTP42858 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.11□□□□□ -2.39
HTTP42858 RNU6-748P-201ENST00000384648 107 ntBASIC0.11□□□□□ -2.39
HTTP42858 U3.29-201ENST00000391296 212 ntBASIC0.11□□□□□ -2.39
HTTP42858 AL138880.1-201ENST00000405824 642 ntBASIC0.11□□□□□ -2.39
HTTP42858 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.11□□□□□ -2.39
HTTP42858 Z77249.1-201ENST00000444622 1175 ntBASIC0.11□□□□□ -2.39
HTTP42858 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.11□□□□□ -2.39
HTTP42858 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.11□□□□□ -2.39
HTTP42858 LARP7P4-201ENST00000481075 878 ntBASIC0.11□□□□□ -2.39
HTTP42858 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.11□□□□□ -2.39
HTTP42858 RNA5SP112-201ENST00000515937 99 ntBASIC0.11□□□□□ -2.39
HTTP42858 SNORA31.8-201ENST00000516327 108 ntBASIC0.11□□□□□ -2.39
HTTP42858 RN7SKP287-201ENST00000516546 266 ntBASIC0.11□□□□□ -2.39
HTTP42858 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.11□□□□□ -2.39
HTTP42858 AL138478.1-201ENST00000612252 832 ntBASIC0.11□□□□□ -2.39
HTTP42858 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.11□□□□□ -2.39
HTTP42858 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.11□□□□□ -2.39
HTTP42858 RNU6-989P-201ENST00000362756 107 ntBASIC0.11□□□□□ -2.39
HTTP42858 SNORD18A-201ENST00000363753 72 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms