Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC024153.1-201ENST00000603103 365 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 BPIFA4P-203ENST00000603168 689 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 AC012468.1-201ENST00000604888 430 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 AC090425.1-201ENST00000610007 140 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 AC091905.2-201ENST00000623143 306 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 AC097372.5-201ENST00000623665 376 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 U6.98-201ENST00000637157 84 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 AC022336.2-201ENST00000568966 2538 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC12P31275 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC12P31275 SRP72P2-201ENST00000344851 1979 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
HOXC12P31275 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
HOXC12P31275 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
HOXC12P31275 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXC12P31275 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXC12P31275 RNU6-784P-201ENST00000384330 106 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 SNORA51.11-201ENST00000384442 131 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 MIR518D-201ENST00000385014 87 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 MIR628-201ENST00000385229 95 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 RNA5SP171-201ENST00000391071 115 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXC12P31275 MIR888-201ENST00000401186 77 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 AP000567.1-201ENST00000406413 156 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 RPL7AP25-201ENST00000423357 805 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 AL591043.1-201ENST00000432461 424 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 AC108059.2-201ENST00000434626 151 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 OR4C10P-201ENST00000434991 931 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 RNU7-170P-201ENST00000459303 61 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 snoU13.22-201ENST00000459428 104 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 RPL23AP14-201ENST00000468281 468 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 AC108751.2-201ENST00000469993 231 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 RPL23AP65-201ENST00000475608 468 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 RPL30P10-201ENST00000488148 337 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 RN7SL812P-201ENST00000493791 279 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXC12P31275 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXC12P31275 AC008958.1-201ENST00000511047 682 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXC12P31275 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.93□□□□□ -1.78
HOXC12P31275 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
HOXC12P31275 AC006130.2-201ENST00000586202 326 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 RPS29P30-201ENST00000600975 111 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 MTND4LP5-201ENST00000605152 292 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXC12P31275 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
HOXC12P31275 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXC12P31275 CPHL1P-201ENST00000461341 3407 ntBASIC3.93□□□□□ -1.78
HOXC12P31275 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXC12P31275 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXC12P31275 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC12P31275 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC12P31275 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC12P31275 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC12P31275 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXC12P31275 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC12P31275 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC12P31275 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC12P31275 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC12P31275 RNU6-1035P-201ENST00000384477 107 ntBASIC3.92□□□□□ -1.78
HOXC12P31275 Y_RNA.526-201ENST00000384572 110 ntBASIC3.92□□□□□ -1.78
HOXC12P31275 Y_RNA.556-201ENST00000384677 113 ntBASIC3.92□□□□□ -1.78
HOXC12P31275 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC12P31275 MTHFD2P2-201ENST00000407725 247 ntBASIC3.92□□□□□ -1.78
HOXC12P31275 MTCO3P19-201ENST00000415864 321 ntBASIC3.92□□□□□ -1.78
HOXC12P31275 CBX3P6-201ENST00000430257 527 ntBASIC3.92□□□□□ -1.78
HOXC12P31275 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXC12P31275 SETP5-201ENST00000437270 562 ntBASIC3.92□□□□□ -1.78
HOXC12P31275 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC12P31275 PHBP16-201ENST00000446318 950 ntBASIC3.92□□□□□ -1.78
HOXC12P31275 RNA5SP310-201ENST00000459084 116 ntBASIC3.92□□□□□ -1.78
HOXC12P31275 RN7SKP210-201ENST00000459176 261 ntBASIC3.92□□□□□ -1.78
HOXC12P31275 AC105137.1-201ENST00000484355 562 ntBASIC3.92□□□□□ -1.78
HOXC12P31275 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXC12P31275 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXC12P31275 MYL12BP1-201ENST00000569826 507 ntBASIC3.92□□□□□ -1.78
HOXC12P31275 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXC12P31275 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXC12P31275 AC006557.5-201ENST00000603126 811 ntBASIC3.92□□□□□ -1.78
HOXC12P31275 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
HOXC12P31275 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXC12P31275 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC12P31275 AC010733.2-201ENST00000589496 5702 ntBASIC3.92□□□□□ -1.78
HOXC12P31275 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXC12P31275 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXC12P31275 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXC12P31275 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXC12P31275 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXC12P31275 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXC12P31275 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXC12P31275 AC091152.2-201ENST00000591628 2569 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 Y_RNA.188-201ENST00000363952 111 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 RNU1-63P-201ENST00000383902 164 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 U1.1-201ENST00000384101 164 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 RNU6-1222P-201ENST00000384615 107 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 Y_RNA.551-201ENST00000384661 102 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXC12P31275 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXC12P31275 MTCO3P29-201ENST00000432119 779 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms