Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AL138880.2-201ENST00000616214 239 ntBASIC3.76□□□□□ -1.81
SMARCA1P28370 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.76□□□□□ -1.81
SMARCA1P28370 AC006111.3-201ENST00000622137 383 ntBASIC3.76□□□□□ -1.81
SMARCA1P28370 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.76□□□□□ -1.81
SMARCA1P28370 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SMARCA1P28370 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.76□□□□□ -1.81
SMARCA1P28370 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.76□□□□□ -1.81
SMARCA1P28370 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
SMARCA1P28370 AC006026.1-201ENST00000444025 1803 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 SRP72P2-201ENST00000344851 1979 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.75□□□□□ -1.81
SMARCA1P28370 RNU1-75P-201ENST00000347264 129 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 SNORD113-7-201ENST00000363762 77 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMARCA1P28370 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.75□□□□□ -1.81
SMARCA1P28370 AP002088.1-201ENST00000382740 395 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 MIR325-201ENST00000385260 98 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 MIR301A-201ENST00000385261 86 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SMARCA1P28370 RNU6-1077P-201ENST00000410506 102 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 CST9LP2-201ENST00000437612 320 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.75□□□□□ -1.81
SMARCA1P28370 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.75□□□□□ -1.81
SMARCA1P28370 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.75□□□□□ -1.81
SMARCA1P28370 RPS3AP12-201ENST00000443616 753 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.75□□□□□ -1.81
SMARCA1P28370 AP002884.2-201ENST00000471647 395 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 RNU6-273P-201ENST00000516937 96 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 RNA5SP291-201ENST00000517222 105 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 AP003122.3-201ENST00000526316 255 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 AC084851.1-201ENST00000529105 249 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.75□□□□□ -1.81
SMARCA1P28370 GLYCAM1-201ENST00000546596 285 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.75□□□□□ -1.81
SMARCA1P28370 MIR5195-201ENST00000583555 115 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 MIR5692C1-201ENST00000585309 91 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.75□□□□□ -1.81
SMARCA1P28370 AL162713.1-201ENST00000604480 262 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 AL022345.1-201ENST00000607292 135 ntBASIC3.75□□□□□ -1.81
SMARCA1P28370 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.75□□□□□ -1.81
SMARCA1P28370 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SMARCA1P28370 FAM35BP-202ENST00000497389 3337 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 AL049641.1-201ENST00000441055 1948 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SMARCA1P28370 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
SMARCA1P28370 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SMARCA1P28370 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.74□□□□□ -1.81
SMARCA1P28370 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.74□□□□□ -1.81
SMARCA1P28370 BX679664.1-201ENST00000434429 253 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 RPL23AP83-201ENST00000434984 473 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 AC006028.1-201ENST00000438379 402 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 AL135752.1-201ENST00000479477 471 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 AC006445.2-201ENST00000510061 472 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.74□□□□□ -1.81
SMARCA1P28370 SNORA19.2-201ENST00000516013 114 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 RNU6-1069P-201ENST00000516612 133 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 RNU6-256P-201ENST00000516747 97 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.74□□□□□ -1.81
SMARCA1P28370 AP000889.2-201ENST00000532684 490 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 HPRT1P3-201ENST00000539521 576 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.74□□□□□ -1.81
SMARCA1P28370 AL157871.3-201ENST00000557231 293 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 HMGB1P14-201ENST00000557424 591 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 AL355375.2-201ENST00000574825 175 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 MIR5692A1-201ENST00000580523 69 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 MIR3941-201ENST00000582572 103 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 AC136601.2-201ENST00000604356 474 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 AC135507.2-201ENST00000612443 309 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 uc_338.15-201ENST00000615470 191 ntBASIC3.74□□□□□ -1.81
SMARCA1P28370 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.74□□□□□ -1.81
SMARCA1P28370 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SMARCA1P28370 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMARCA1P28370 RNU4-79P-201ENST00000362764 141 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 Y_RNA.58-201ENST00000362807 102 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 Y_RNA.154-201ENST00000363624 102 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 RNY3P1-201ENST00000365085 102 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 RNY3-201ENST00000365484 102 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.73□□□□□ -1.81
SMARCA1P28370 RNU6-1013P-201ENST00000384180 107 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 SNORA9-201ENST00000384215 133 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 Y_RNA.490-201ENST00000384413 102 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 MIR450B-201ENST00000401182 78 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 AC092047.1-201ENST00000424997 240 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 TRIAP1P1-201ENST00000427062 225 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.73□□□□□ -1.81
SMARCA1P28370 RPL23AP69-201ENST00000431134 458 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 AC006483.1-201ENST00000487308 313 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 AC139453.3-201ENST00000493276 369 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.73□□□□□ -1.81
SMARCA1P28370 SNORA31.1-201ENST00000515993 133 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 SNORA31.5-201ENST00000516190 133 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.73□□□□□ -1.81
SMARCA1P28370 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.73□□□□□ -1.81
SMARCA1P28370 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.73□□□□□ -1.81
SMARCA1P28370 MIR3609-201ENST00000582661 80 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 HSPE1P7-201ENST00000604681 321 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 AC002044.1-201ENST00000606707 158 ntBASIC3.73□□□□□ -1.81
SMARCA1P28370 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms