Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VARSP26640 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VARSP26640 Y_RNA.498-201ENST00000384460 102 ntBASIC4.99□□□□□ -1.61
VARSP26640 RNU6-376P-201ENST00000384731 106 ntBASIC4.99□□□□□ -1.61
VARSP26640 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VARSP26640 RNU6-1199P-201ENST00000411249 104 ntBASIC4.99□□□□□ -1.61
VARSP26640 AC245028.1-201ENST00000423259 256 ntBASIC4.99□□□□□ -1.61
VARSP26640 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.99□□□□□ -1.61
VARSP26640 RPL23AP58-201ENST00000440453 469 ntBASIC4.99□□□□□ -1.61
VARSP26640 AC009127.1-201ENST00000467090 155 ntBASIC4.99□□□□□ -1.61
VARSP26640 AC016256.1-201ENST00000547971 354 ntBASIC4.99□□□□□ -1.61
VARSP26640 AC009127.3-201ENST00000570531 403 ntBASIC4.99□□□□□ -1.61
VARSP26640 AC136624.4-201ENST00000573044 370 ntBASIC4.99□□□□□ -1.61
VARSP26640 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.99□□□□□ -1.61
VARSP26640 RN7SL176P-201ENST00000580352 264 ntBASIC4.99□□□□□ -1.61
VARSP26640 Y_RNA.802-201ENST00000614892 130 ntBASIC4.99□□□□□ -1.61
VARSP26640 AC024581.2-201ENST00000619986 252 ntBASIC4.99□□□□□ -1.61
VARSP26640 AC006065.5-201ENST00000623427 349 ntBASIC4.99□□□□□ -1.61
VARSP26640 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.99□□□□□ -1.61
VARSP26640 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.99□□□□□ -1.61
VARSP26640 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VARSP26640 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VARSP26640 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.99□□□□□ -1.61
VARSP26640 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
VARSP26640 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VARSP26640 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VARSP26640 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VARSP26640 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.99□□□□□ -1.61
VARSP26640 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
VARSP26640 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VARSP26640 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VARSP26640 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
VARSP26640 SNORD115-8-201ENST00000363856 82 ntBASIC4.98□□□□□ -1.61
VARSP26640 SNORD115-38-201ENST00000365037 82 ntBASIC4.98□□□□□ -1.61
VARSP26640 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
VARSP26640 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.98□□□□□ -1.61
VARSP26640 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.98□□□□□ -1.61
VARSP26640 RNU6-1064P-201ENST00000410626 104 ntBASIC4.98□□□□□ -1.61
VARSP26640 RPL36AP10-201ENST00000421785 322 ntBASIC4.98□□□□□ -1.61
VARSP26640 U8.19-201ENST00000459095 133 ntBASIC4.98□□□□□ -1.61
VARSP26640 SNORD108-201ENST00000459332 71 ntBASIC4.98□□□□□ -1.61
VARSP26640 AL132838.2-201ENST00000492041 314 ntBASIC4.98□□□□□ -1.61
VARSP26640 RN7SKP164-201ENST00000516138 266 ntBASIC4.98□□□□□ -1.61
VARSP26640 RNA5SP291-201ENST00000517222 105 ntBASIC4.98□□□□□ -1.61
VARSP26640 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.98□□□□□ -1.61
VARSP26640 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VARSP26640 MIR3934-201ENST00000579806 107 ntBASIC4.98□□□□□ -1.61
VARSP26640 MIR4436B2-201ENST00000581415 91 ntBASIC4.98□□□□□ -1.61
VARSP26640 MIR4436B1-201ENST00000583272 91 ntBASIC4.98□□□□□ -1.61
VARSP26640 AC069294.1-201ENST00000608397 350 ntBASIC4.98□□□□□ -1.61
VARSP26640 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VARSP26640 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
VARSP26640 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.98□□□□□ -1.61
VARSP26640 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
VARSP26640 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VARSP26640 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VARSP26640 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
VARSP26640 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VARSP26640 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VARSP26640 Y_RNA.172-201ENST00000363765 102 ntBASIC4.97□□□□□ -1.61
VARSP26640 RNU6-270P-201ENST00000364131 105 ntBASIC4.97□□□□□ -1.61
VARSP26640 RNU1-140P-201ENST00000365040 165 ntBASIC4.97□□□□□ -1.61
VARSP26640 RNU6-763P-201ENST00000390865 106 ntBASIC4.97□□□□□ -1.61
VARSP26640 MIR1182-201ENST00000408363 97 ntBASIC4.97□□□□□ -1.61
VARSP26640 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.97□□□□□ -1.61
VARSP26640 OR2AM1P-201ENST00000422137 422 ntBASIC4.97□□□□□ -1.61
VARSP26640 RPL23AP95-201ENST00000426806 265 ntBASIC4.97□□□□□ -1.61
VARSP26640 AL356867.1-201ENST00000429623 299 ntBASIC4.97□□□□□ -1.61
VARSP26640 AC009238.2-201ENST00000431026 355 ntBASIC4.97□□□□□ -1.61
VARSP26640 GPM6BP3-201ENST00000442797 145 ntBASIC4.97□□□□□ -1.61
VARSP26640 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.97□□□□□ -1.61
VARSP26640 AC021269.2-201ENST00000532318 330 ntBASIC4.97□□□□□ -1.61
VARSP26640 AC090877.1-201ENST00000561418 344 ntBASIC4.97□□□□□ -1.61
VARSP26640 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.97□□□□□ -1.61
VARSP26640 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.97□□□□□ -1.61
VARSP26640 MIR6129-201ENST00000616087 109 ntBASIC4.97□□□□□ -1.61
VARSP26640 AC015914.2-201ENST00000618167 288 ntBASIC4.97□□□□□ -1.61
VARSP26640 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.97□□□□□ -1.61
VARSP26640 AL034408.1-202ENST00000636088 415 ntBASIC4.97□□□□□ -1.61
VARSP26640 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VARSP26640 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VARSP26640 AC063976.2-201ENST00000425667 3556 ntBASIC4.97□□□□□ -1.61
VARSP26640 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VARSP26640 MTND5P35-201ENST00000557537 1720 ntBASIC4.97□□□□□ -1.61
VARSP26640 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VARSP26640 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VARSP26640 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.61
VARSP26640 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
VARSP26640 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VARSP26640 OR14L1P-202ENST00000641545 3009 ntBASIC4.96□□□□□ -1.62
VARSP26640 Y_RNA.337-201ENST00000365312 102 ntBASIC4.96□□□□□ -1.62
VARSP26640 RNA5SP235-201ENST00000365411 114 ntBASIC4.96□□□□□ -1.62
VARSP26640 Y_RNA.563-201ENST00000384707 108 ntBASIC4.96□□□□□ -1.62
VARSP26640 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.96□□□□□ -1.62
VARSP26640 U3.32-201ENST00000408116 212 ntBASIC4.96□□□□□ -1.62
VARSP26640 NDUFB4P7-201ENST00000423198 363 ntBASIC4.96□□□□□ -1.62
VARSP26640 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.96□□□□□ -1.62
VARSP26640 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.96□□□□□ -1.62
VARSP26640 AC006463.2-201ENST00000473326 348 ntBASIC4.96□□□□□ -1.62
VARSP26640 AC134698.5-201ENST00000519444 336 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms