Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 RNA5SP291-201ENST00000517222 105 ntBASIC2.84□□□□□ -1.95
MSH3P20585 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.84□□□□□ -1.95
MSH3P20585 AF235103.2-201ENST00000525753 346 ntBASIC2.84□□□□□ -1.95
MSH3P20585 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.84□□□□□ -1.95
MSH3P20585 AL137161.1-201ENST00000532231 390 ntBASIC2.84□□□□□ -1.95
MSH3P20585 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.84□□□□□ -1.95
MSH3P20585 AC010525.2-201ENST00000590920 195 ntBASIC2.84□□□□□ -1.95
MSH3P20585 BNIP3P9-201ENST00000603714 553 ntBASIC2.84□□□□□ -1.95
MSH3P20585 AL138889.2-201ENST00000603883 242 ntBASIC2.84□□□□□ -1.95
MSH3P20585 AC069234.5-201ENST00000611056 416 ntBASIC2.84□□□□□ -1.95
MSH3P20585 AC135507.2-201ENST00000612443 309 ntBASIC2.84□□□□□ -1.95
MSH3P20585 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.84□□□□□ -1.95
MSH3P20585 DUXAP9-208ENST00000622815 614 ntBASIC2.84□□□□□ -1.95
MSH3P20585 MTND4P14-201ENST00000435799 1354 ntBASIC2.84□□□□□ -1.96
MSH3P20585 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.84□□□□□ -1.96
MSH3P20585 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
MSH3P20585 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.83□□□□□ -1.96
MSH3P20585 OR4G1P-203ENST00000641984 1631 ntBASIC2.83□□□□□ -1.96
MSH3P20585 Y_RNA.245-201ENST00000364493 95 ntBASIC2.83□□□□□ -1.96
MSH3P20585 SNORA4.3-201ENST00000365564 137 ntBASIC2.83□□□□□ -1.96
MSH3P20585 MIR512-1-201ENST00000384913 84 ntBASIC2.83□□□□□ -1.96
MSH3P20585 MIR514A2-201ENST00000385131 88 ntBASIC2.83□□□□□ -1.96
MSH3P20585 MIR514A3-201ENST00000385132 88 ntBASIC2.83□□□□□ -1.96
MSH3P20585 MIR325-201ENST00000385260 98 ntBASIC2.83□□□□□ -1.96
MSH3P20585 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
MSH3P20585 SNORD37.1-201ENST00000390968 65 ntBASIC2.83□□□□□ -1.96
MSH3P20585 AL606923.1-201ENST00000406616 190 ntBASIC2.83□□□□□ -1.96
MSH3P20585 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.83□□□□□ -1.96
MSH3P20585 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
MSH3P20585 RNA5SP118-201ENST00000410385 109 ntBASIC2.83□□□□□ -1.96
MSH3P20585 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.83□□□□□ -1.96
MSH3P20585 ATG3P1-201ENST00000419507 911 ntBASIC2.83□□□□□ -1.96
MSH3P20585 AL139413.1-201ENST00000421309 217 ntBASIC2.83□□□□□ -1.96
MSH3P20585 SRIP2-201ENST00000428470 166 ntBASIC2.83□□□□□ -1.96
MSH3P20585 AL591704.1-201ENST00000432574 275 ntBASIC2.83□□□□□ -1.96
MSH3P20585 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.83□□□□□ -1.96
MSH3P20585 RPS29P6-201ENST00000438196 145 ntBASIC2.83□□□□□ -1.96
MSH3P20585 Z82210.1-201ENST00000440037 231 ntBASIC2.83□□□□□ -1.96
MSH3P20585 MTCO2P3-201ENST00000442543 421 ntBASIC2.83□□□□□ -1.96
MSH3P20585 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.83□□□□□ -1.96
MSH3P20585 MTND3P16-201ENST00000452205 344 ntBASIC2.83□□□□□ -1.96
MSH3P20585 AL031183.1-201ENST00000457667 207 ntBASIC2.83□□□□□ -1.96
MSH3P20585 RPL37P6-201ENST00000460682 294 ntBASIC2.83□□□□□ -1.96
MSH3P20585 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.83□□□□□ -1.96
MSH3P20585 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.83□□□□□ -1.96
MSH3P20585 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.83□□□□□ -1.96
MSH3P20585 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.83□□□□□ -1.96
MSH3P20585 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.83□□□□□ -1.96
MSH3P20585 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.83□□□□□ -1.96
MSH3P20585 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.83□□□□□ -1.96
MSH3P20585 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.83□□□□□ -1.96
MSH3P20585 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.83□□□□□ -1.96
MSH3P20585 AC118273.2-201ENST00000532092 465 ntBASIC2.83□□□□□ -1.96
MSH3P20585 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.83□□□□□ -1.96
MSH3P20585 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
MSH3P20585 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.83□□□□□ -1.96
MSH3P20585 AC060780.3-201ENST00000589464 80 ntBASIC2.83□□□□□ -1.96
MSH3P20585 AC136601.2-201ENST00000604356 474 ntBASIC2.83□□□□□ -1.96
MSH3P20585 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.83□□□□□ -1.96
MSH3P20585 AL137790.1-201ENST00000634283 177 ntBASIC2.83□□□□□ -1.96
MSH3P20585 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
MSH3P20585 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.83□□□□□ -1.96
MSH3P20585 HSPA8P4-201ENST00000511877 1920 ntBASIC2.83□□□□□ -1.96
MSH3P20585 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.83□□□□□ -1.96
MSH3P20585 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
MSH3P20585 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
MSH3P20585 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
MSH3P20585 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.82□□□□□ -1.96
MSH3P20585 AL049641.1-201ENST00000441055 1948 ntBASIC2.82□□□□□ -1.96
MSH3P20585 RNY3P14-201ENST00000384309 102 ntBASIC2.82□□□□□ -1.96
MSH3P20585 RNU6-373P-201ENST00000411247 98 ntBASIC2.82□□□□□ -1.96
MSH3P20585 RNA5SP111-201ENST00000411386 101 ntBASIC2.82□□□□□ -1.96
MSH3P20585 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH3P20585 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH3P20585 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.82□□□□□ -1.96
MSH3P20585 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH3P20585 AL139132.1-201ENST00000431587 344 ntBASIC2.82□□□□□ -1.96
MSH3P20585 GPM6BP2-201ENST00000432046 144 ntBASIC2.82□□□□□ -1.96
MSH3P20585 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH3P20585 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH3P20585 GPM6BP1-201ENST00000446387 144 ntBASIC2.82□□□□□ -1.96
MSH3P20585 MTND4P18-201ENST00000447010 465 ntBASIC2.82□□□□□ -1.96
MSH3P20585 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.82□□□□□ -1.96
MSH3P20585 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH3P20585 AC091885.1-201ENST00000506658 268 ntBASIC2.82□□□□□ -1.96
MSH3P20585 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
MSH3P20585 SCARNA13-201ENST00000516672 275 ntBASIC2.82□□□□□ -1.96
MSH3P20585 RNA5SP290-201ENST00000517133 127 ntBASIC2.82□□□□□ -1.96
MSH3P20585 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH3P20585 MTND4P7-201ENST00000523876 130 ntBASIC2.82□□□□□ -1.96
MSH3P20585 AP000867.2-201ENST00000532468 320 ntBASIC2.82□□□□□ -1.96
MSH3P20585 HPRT1P3-201ENST00000539521 576 ntBASIC2.82□□□□□ -1.96
MSH3P20585 MIR5583-1-201ENST00000580941 59 ntBASIC2.82□□□□□ -1.96
MSH3P20585 MIR3609-201ENST00000582661 80 ntBASIC2.82□□□□□ -1.96
MSH3P20585 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.82□□□□□ -1.96
MSH3P20585 AC024153.1-201ENST00000603103 365 ntBASIC2.82□□□□□ -1.96
MSH3P20585 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH3P20585 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.82□□□□□ -1.96
MSH3P20585 uc_338.34-201ENST00000617467 174 ntBASIC2.82□□□□□ -1.96
MSH3P20585 AC006504.8-201ENST00000621046 635 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms