Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 SNORD114-19-201ENST00000363072 75 ntBASIC3.93□□□□□ -1.78
ATF4P18848 SNORD115-32-201ENST00000364079 82 ntBASIC3.93□□□□□ -1.78
ATF4P18848 RNU4-56P-201ENST00000364700 142 ntBASIC3.93□□□□□ -1.78
ATF4P18848 MIR153-2-201ENST00000385225 87 ntBASIC3.93□□□□□ -1.78
ATF4P18848 MIR765-201ENST00000390226 114 ntBASIC3.93□□□□□ -1.78
ATF4P18848 EI24P2-201ENST00000397776 1076 ntBASIC3.93□□□□□ -1.78
ATF4P18848 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.93□□□□□ -1.78
ATF4P18848 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.93□□□□□ -1.78
ATF4P18848 AC140479.3-201ENST00000418944 1126 ntBASIC3.93□□□□□ -1.78
ATF4P18848 DPH3P2-201ENST00000422618 250 ntBASIC3.93□□□□□ -1.78
ATF4P18848 AP000907.1-201ENST00000428428 510 ntBASIC3.93□□□□□ -1.78
ATF4P18848 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.93□□□□□ -1.78
ATF4P18848 RPS3AP12-201ENST00000443616 753 ntBASIC3.93□□□□□ -1.78
ATF4P18848 OSTCP8-201ENST00000445117 448 ntBASIC3.93□□□□□ -1.78
ATF4P18848 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.93□□□□□ -1.78
ATF4P18848 CHEK2P4-201ENST00000450340 246 ntBASIC3.93□□□□□ -1.78
ATF4P18848 RN7SL443P-201ENST00000464331 290 ntBASIC3.93□□□□□ -1.78
ATF4P18848 AC087477.1-201ENST00000465747 340 ntBASIC3.93□□□□□ -1.78
ATF4P18848 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.93□□□□□ -1.78
ATF4P18848 RPL30P1-201ENST00000488676 339 ntBASIC3.93□□□□□ -1.78
ATF4P18848 AC108022.1-201ENST00000493466 478 ntBASIC3.93□□□□□ -1.78
ATF4P18848 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.93□□□□□ -1.78
ATF4P18848 MIR2355-201ENST00000517199 87 ntBASIC3.93□□□□□ -1.78
ATF4P18848 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATF4P18848 AC040926.1-201ENST00000530195 238 ntBASIC3.93□□□□□ -1.78
ATF4P18848 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.93□□□□□ -1.78
ATF4P18848 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.93□□□□□ -1.78
ATF4P18848 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.93□□□□□ -1.78
ATF4P18848 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.93□□□□□ -1.78
ATF4P18848 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.93□□□□□ -1.78
ATF4P18848 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATF4P18848 uc_338.14-201ENST00000613162 166 ntBASIC3.93□□□□□ -1.78
ATF4P18848 CR392039.5-201ENST00000623201 510 ntBASIC3.93□□□□□ -1.78
ATF4P18848 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATF4P18848 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
ATF4P18848 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
ATF4P18848 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
ATF4P18848 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATF4P18848 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
ATF4P18848 ZNF72P-201ENST00000425869 1908 ntBASIC3.92□□□□□ -1.78
ATF4P18848 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATF4P18848 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATF4P18848 RNU1-132P-201ENST00000364300 164 ntBASIC3.92□□□□□ -1.78
ATF4P18848 MIR32-201ENST00000384965 70 ntBASIC3.92□□□□□ -1.78
ATF4P18848 U3.22-201ENST00000391120 215 ntBASIC3.92□□□□□ -1.78
ATF4P18848 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATF4P18848 AL133475.1-201ENST00000404414 305 ntBASIC3.92□□□□□ -1.78
ATF4P18848 Z82188.1-201ENST00000436709 154 ntBASIC3.92□□□□□ -1.78
ATF4P18848 H2AFZP6-201ENST00000444403 394 ntBASIC3.92□□□□□ -1.78
ATF4P18848 AL389915.2-201ENST00000454576 441 ntBASIC3.92□□□□□ -1.78
ATF4P18848 RN7SL222P-201ENST00000476452 299 ntBASIC3.92□□□□□ -1.78
ATF4P18848 RPL22P13-201ENST00000493291 347 ntBASIC3.92□□□□□ -1.78
ATF4P18848 AC072052.1-201ENST00000496556 306 ntBASIC3.92□□□□□ -1.78
ATF4P18848 RNU6-567P-201ENST00000516746 107 ntBASIC3.92□□□□□ -1.78
ATF4P18848 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.92□□□□□ -1.78
ATF4P18848 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.92□□□□□ -1.78
ATF4P18848 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ATF4P18848 MIR5571-201ENST00000577998 113 ntBASIC3.92□□□□□ -1.78
ATF4P18848 AC011447.4-201ENST00000587562 111 ntBASIC3.92□□□□□ -1.78
ATF4P18848 AC012493.2-201ENST00000595083 291 ntBASIC3.92□□□□□ -1.78
ATF4P18848 AC006557.5-201ENST00000603126 811 ntBASIC3.92□□□□□ -1.78
ATF4P18848 SNORA43.4-201ENST00000629559 138 ntBASIC3.92□□□□□ -1.78
ATF4P18848 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.92□□□□□ -1.78
ATF4P18848 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATF4P18848 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATF4P18848 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.92□□□□□ -1.78
ATF4P18848 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.92□□□□□ -1.78
ATF4P18848 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATF4P18848 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATF4P18848 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATF4P18848 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATF4P18848 Y_RNA.133-201ENST00000363428 110 ntBASIC3.91□□□□□ -1.78
ATF4P18848 RNU6-1285P-201ENST00000363480 105 ntBASIC3.91□□□□□ -1.78
ATF4P18848 Y_RNA.144-201ENST00000363521 113 ntBASIC3.91□□□□□ -1.78
ATF4P18848 RNU6-450P-201ENST00000364654 107 ntBASIC3.91□□□□□ -1.78
ATF4P18848 Y_RNA.358-201ENST00000365491 99 ntBASIC3.91□□□□□ -1.78
ATF4P18848 SNORA63.7-201ENST00000365579 123 ntBASIC3.91□□□□□ -1.78
ATF4P18848 Y_RNA.557-201ENST00000384680 107 ntBASIC3.91□□□□□ -1.78
ATF4P18848 MIR600-201ENST00000385007 98 ntBASIC3.91□□□□□ -1.78
ATF4P18848 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATF4P18848 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC3.91□□□□□ -1.78
ATF4P18848 AC004383.1-201ENST00000438135 289 ntBASIC3.91□□□□□ -1.78
ATF4P18848 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.91□□□□□ -1.78
ATF4P18848 TOMM22P6-201ENST00000465035 409 ntBASIC3.91□□□□□ -1.78
ATF4P18848 RN7SL97P-201ENST00000486780 299 ntBASIC3.91□□□□□ -1.78
ATF4P18848 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.91□□□□□ -1.78
ATF4P18848 RPS27P26-201ENST00000494583 239 ntBASIC3.91□□□□□ -1.78
ATF4P18848 ANXA2P1-201ENST00000505539 926 ntBASIC3.91□□□□□ -1.78
ATF4P18848 AC008958.1-201ENST00000511047 682 ntBASIC3.91□□□□□ -1.78
ATF4P18848 AC109329.1-201ENST00000518744 317 ntBASIC3.91□□□□□ -1.78
ATF4P18848 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.91□□□□□ -1.78
ATF4P18848 AC008269.2-201ENST00000561915 1105 ntBASIC3.91□□□□□ -1.78
ATF4P18848 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.91□□□□□ -1.78
ATF4P18848 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.91□□□□□ -1.78
ATF4P18848 CYP4A43P-201ENST00000568156 121 ntBASIC3.91□□□□□ -1.78
ATF4P18848 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.91□□□□□ -1.78
ATF4P18848 AC011487.3-201ENST00000593607 453 ntBASIC3.91□□□□□ -1.78
ATF4P18848 AL731566.2-201ENST00000618971 317 ntBASIC3.91□□□□□ -1.78
ATF4P18848 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.91□□□□□ -1.78
ATF4P18848 AC007546.2-201ENST00000623996 360 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms