Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 SNORA80E-201ENST00000384744 137 ntBASIC2.5□□□□□ -2.01
VCLP18206 MIR518D-201ENST00000385014 87 ntBASIC2.5□□□□□ -2.01
VCLP18206 RNU6-387P-201ENST00000411331 105 ntBASIC2.5□□□□□ -2.01
VCLP18206 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.5□□□□□ -2.01
VCLP18206 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.5□□□□□ -2.01
VCLP18206 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.5□□□□□ -2.01
VCLP18206 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.5□□□□□ -2.01
VCLP18206 CETN4P-201ENST00000432407 469 ntBASIC2.5□□□□□ -2.01
VCLP18206 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.5□□□□□ -2.01
VCLP18206 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.5□□□□□ -2.01
VCLP18206 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.5□□□□□ -2.01
VCLP18206 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VCLP18206 AL583843.1-201ENST00000456070 346 ntBASIC2.5□□□□□ -2.01
VCLP18206 RPL36AP48-201ENST00000485521 314 ntBASIC2.5□□□□□ -2.01
VCLP18206 AC090096.1-201ENST00000489168 390 ntBASIC2.5□□□□□ -2.01
VCLP18206 RN7SKP24-201ENST00000515888 284 ntBASIC2.5□□□□□ -2.01
VCLP18206 RNU4-29P-201ENST00000515943 174 ntBASIC2.5□□□□□ -2.01
VCLP18206 RNU6-1220P-201ENST00000517126 108 ntBASIC2.5□□□□□ -2.01
VCLP18206 CKS1BP7-201ENST00000522230 235 ntBASIC2.5□□□□□ -2.01
VCLP18206 AP000889.1-201ENST00000530968 660 ntBASIC2.5□□□□□ -2.01
VCLP18206 AC007834.2-201ENST00000536310 343 ntBASIC2.5□□□□□ -2.01
VCLP18206 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.5□□□□□ -2.01
VCLP18206 AC010186.2-204ENST00000537668 439 ntBASIC2.5□□□□□ -2.01
VCLP18206 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.5□□□□□ -2.01
VCLP18206 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.5□□□□□ -2.01
VCLP18206 AC008088.1-201ENST00000580993 280 ntBASIC2.5□□□□□ -2.01
VCLP18206 MIR4672-201ENST00000583126 81 ntBASIC2.5□□□□□ -2.01
VCLP18206 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.5□□□□□ -2.01
VCLP18206 MIR548AC-201ENST00000585049 88 ntBASIC2.5□□□□□ -2.01
VCLP18206 SEPT7P9-203ENST00000604116 343 ntBASIC2.5□□□□□ -2.01
VCLP18206 AC121247.2-201ENST00000604776 136 ntBASIC2.5□□□□□ -2.01
VCLP18206 MIR6895-201ENST00000613497 78 ntBASIC2.5□□□□□ -2.01
VCLP18206 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.5□□□□□ -2.01
VCLP18206 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.5□□□□□ -2.01
VCLP18206 AC138649.3-201ENST00000622154 254 ntBASIC2.5□□□□□ -2.01
VCLP18206 AC025034.2-201ENST00000623264 286 ntBASIC2.5□□□□□ -2.01
VCLP18206 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.5□□□□□ -2.01
VCLP18206 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VCLP18206 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VCLP18206 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
VCLP18206 CKAP2P1-201ENST00000555477 2049 ntBASIC2.49□□□□□ -2.01
VCLP18206 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VCLP18206 AC138393.1-203ENST00000327086 343 ntBASIC2.49□□□□□ -2.01
VCLP18206 RNU6-1072P-201ENST00000384703 107 ntBASIC2.49□□□□□ -2.01
VCLP18206 RNU6-443P-201ENST00000384780 107 ntBASIC2.49□□□□□ -2.01
VCLP18206 U3.37-201ENST00000408528 213 ntBASIC2.49□□□□□ -2.01
VCLP18206 U6atac.2-201ENST00000408644 118 ntBASIC2.49□□□□□ -2.01
VCLP18206 Y_RNA.623-201ENST00000411128 95 ntBASIC2.49□□□□□ -2.01
VCLP18206 RNU6-195P-201ENST00000411352 109 ntBASIC2.49□□□□□ -2.01
VCLP18206 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.49□□□□□ -2.01
VCLP18206 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VCLP18206 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.49□□□□□ -2.01
VCLP18206 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.49□□□□□ -2.01
VCLP18206 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.49□□□□□ -2.01
VCLP18206 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.49□□□□□ -2.01
VCLP18206 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.49□□□□□ -2.01
VCLP18206 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.49□□□□□ -2.01
VCLP18206 AC079781.2-201ENST00000446424 169 ntBASIC2.49□□□□□ -2.01
VCLP18206 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.49□□□□□ -2.01
VCLP18206 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.49□□□□□ -2.01
VCLP18206 AC080013.2-201ENST00000460866 323 ntBASIC2.49□□□□□ -2.01
VCLP18206 MTND4P2-201ENST00000507767 1203 ntBASIC2.49□□□□□ -2.01
VCLP18206 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.49□□□□□ -2.01
VCLP18206 RNA5SP148-201ENST00000516527 94 ntBASIC2.49□□□□□ -2.01
VCLP18206 RNU6-410P-201ENST00000517006 107 ntBASIC2.49□□□□□ -2.01
VCLP18206 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.49□□□□□ -2.01
VCLP18206 RANP3-201ENST00000530970 276 ntBASIC2.49□□□□□ -2.01
VCLP18206 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.49□□□□□ -2.01
VCLP18206 OSBPL9P5-201ENST00000542581 171 ntBASIC2.49□□□□□ -2.01
VCLP18206 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.49□□□□□ -2.01
VCLP18206 AC092325.1-201ENST00000566449 554 ntBASIC2.49□□□□□ -2.01
VCLP18206 AL158211.1-201ENST00000566763 763 ntBASIC2.49□□□□□ -2.01
VCLP18206 MIR5571-201ENST00000577998 113 ntBASIC2.49□□□□□ -2.01
VCLP18206 MIR4513-201ENST00000581077 86 ntBASIC2.49□□□□□ -2.01
VCLP18206 MIR5694-201ENST00000581190 76 ntBASIC2.49□□□□□ -2.01
VCLP18206 AC098848.2-201ENST00000588023 330 ntBASIC2.49□□□□□ -2.01
VCLP18206 AC007621.1-201ENST00000604544 437 ntBASIC2.49□□□□□ -2.01
VCLP18206 AL670379.4-201ENST00000605279 254 ntBASIC2.49□□□□□ -2.01
VCLP18206 MIR98-201ENST00000606724 119 ntBASIC2.49□□□□□ -2.01
VCLP18206 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
VCLP18206 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VCLP18206 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.49□□□□□ -2.01
VCLP18206 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VCLP18206 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.48□□□□□ -2.01
VCLP18206 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.48□□□□□ -2.01
VCLP18206 RNU6-61P-201ENST00000365528 109 ntBASIC2.48□□□□□ -2.01
VCLP18206 AF228730.1-201ENST00000397972 663 ntBASIC2.48□□□□□ -2.01
VCLP18206 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.48□□□□□ -2.01
VCLP18206 AL365338.1-201ENST00000422282 858 ntBASIC2.48□□□□□ -2.01
VCLP18206 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.48□□□□□ -2.01
VCLP18206 CALM2P2-201ENST00000428512 440 ntBASIC2.48□□□□□ -2.01
VCLP18206 RPL30P4-201ENST00000429309 333 ntBASIC2.48□□□□□ -2.01
VCLP18206 AL627311.1-201ENST00000431514 115 ntBASIC2.48□□□□□ -2.01
VCLP18206 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.48□□□□□ -2.01
VCLP18206 AC012308.1-201ENST00000451232 178 ntBASIC2.48□□□□□ -2.01
VCLP18206 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.48□□□□□ -2.01
VCLP18206 RPL23AP45-201ENST00000476406 468 ntBASIC2.48□□□□□ -2.01
VCLP18206 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.48□□□□□ -2.01
VCLP18206 AC022493.1-201ENST00000492984 337 ntBASIC2.48□□□□□ -2.01
VCLP18206 HMGB3P3-201ENST00000510526 400 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 751.7 ms