Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.01□□□□□ -1.45
CD44P16070 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CD44P16070 AC012616.1-201ENST00000600294 197 ntBASIC6.01□□□□□ -1.45
CD44P16070 YPEL5P2-201ENST00000605553 359 ntBASIC6.01□□□□□ -1.45
CD44P16070 AC126915.2-201ENST00000610957 190 ntBASIC6.01□□□□□ -1.45
CD44P16070 Pinc.1-201ENST00000616452 154 ntBASIC6.01□□□□□ -1.45
CD44P16070 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.01□□□□□ -1.45
CD44P16070 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.01□□□□□ -1.45
CD44P16070 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CD44P16070 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CD44P16070 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC6.01□□□□□ -1.45
CD44P16070 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CD44P16070 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CD44P16070 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
CD44P16070 AL034549.2-201ENST00000618285 3373 ntBASIC6□□□□□ -1.45
CD44P16070 AC092376.2-201ENST00000622621 4116 ntBASIC6□□□□□ -1.45
CD44P16070 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC6□□□□□ -1.45
CD44P16070 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
CD44P16070 Y_RNA.316-201ENST00000365118 111 ntBASIC6□□□□□ -1.45
CD44P16070 MIR551A-201ENST00000385042 96 ntBASIC6□□□□□ -1.45
CD44P16070 AC079780.1-201ENST00000428259 207 ntBASIC6□□□□□ -1.45
CD44P16070 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC6□□□□□ -1.45
CD44P16070 AC000111.2-201ENST00000448200 210 ntBASIC6□□□□□ -1.45
CD44P16070 AL445665.1-202ENST00000452436 324 ntBASIC6□□□□□ -1.45
CD44P16070 RNU2-11P-201ENST00000459191 187 ntBASIC6□□□□□ -1.45
CD44P16070 SRIP1-201ENST00000489235 288 ntBASIC6□□□□□ -1.45
CD44P16070 RPS26P48-201ENST00000491713 339 ntBASIC6□□□□□ -1.45
CD44P16070 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6□□□□□ -1.45
CD44P16070 MIR4662B-201ENST00000579498 81 ntBASIC6□□□□□ -1.45
CD44P16070 MIR4271-201ENST00000582451 67 ntBASIC6□□□□□ -1.45
CD44P16070 TCL6_2.1-201ENST00000615162 119 ntBASIC6□□□□□ -1.45
CD44P16070 AC005562.2-201ENST00000618264 111 ntBASIC6□□□□□ -1.45
CD44P16070 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CD44P16070 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC6□□□□□ -1.45
CD44P16070 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CD44P16070 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6□□□□□ -1.45
CD44P16070 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CD44P16070 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CD44P16070 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CD44P16070 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CD44P16070 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CD44P16070 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CD44P16070 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
CD44P16070 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CD44P16070 Y_RNA.4-201ENST00000362333 112 ntBASIC5.99□□□□□ -1.45
CD44P16070 SNORA33-201ENST00000363664 130 ntBASIC5.99□□□□□ -1.45
CD44P16070 Y_RNA.486-201ENST00000384398 107 ntBASIC5.99□□□□□ -1.45
CD44P16070 RN7SKP267-201ENST00000410381 285 ntBASIC5.99□□□□□ -1.45
CD44P16070 RPL19P16-201ENST00000433839 588 ntBASIC5.99□□□□□ -1.45
CD44P16070 AL138899.2-201ENST00000439139 499 ntBASIC5.99□□□□□ -1.45
CD44P16070 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CD44P16070 SCARNA15-202ENST00000516881 127 ntBASIC5.99□□□□□ -1.45
CD44P16070 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.99□□□□□ -1.45
CD44P16070 AP004607.2-201ENST00000533949 322 ntBASIC5.99□□□□□ -1.45
CD44P16070 AL121603.1-201ENST00000553815 142 ntBASIC5.99□□□□□ -1.45
CD44P16070 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.99□□□□□ -1.45
CD44P16070 AC027176.1-201ENST00000560204 514 ntBASIC5.99□□□□□ -1.45
CD44P16070 AC136601.2-201ENST00000604356 474 ntBASIC5.99□□□□□ -1.45
CD44P16070 AC145423.2-201ENST00000610631 239 ntBASIC5.99□□□□□ -1.45
CD44P16070 U73479.1-201ENST00000618062 168 ntBASIC5.99□□□□□ -1.45
CD44P16070 AC018692.3-201ENST00000623929 123 ntBASIC5.99□□□□□ -1.45
CD44P16070 SNORD98-201ENST00000636377 67 ntBASIC5.99□□□□□ -1.45
CD44P16070 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CD44P16070 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CD44P16070 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.99□□□□□ -1.45
CD44P16070 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
CD44P16070 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.99□□□□□ -1.45
CD44P16070 AL137141.1-201ENST00000624622 4836 ntBASIC5.99□□□□□ -1.45
CD44P16070 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CD44P16070 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CD44P16070 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CD44P16070 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CD44P16070 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CD44P16070 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CD44P16070 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CD44P16070 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.98□□□□□ -1.45
CD44P16070 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CD44P16070 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CD44P16070 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CD44P16070 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CD44P16070 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CD44P16070 FAM35CP-201ENST00000554755 2470 ntBASIC5.98□□□□□ -1.45
CD44P16070 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CD44P16070 RNU6-173P-201ENST00000364215 104 ntBASIC5.98□□□□□ -1.45
CD44P16070 RNU1-64P-201ENST00000365443 163 ntBASIC5.98□□□□□ -1.45
CD44P16070 RNU6-603P-201ENST00000411403 107 ntBASIC5.98□□□□□ -1.45
CD44P16070 RPL36AP10-201ENST00000421785 322 ntBASIC5.98□□□□□ -1.45
CD44P16070 AC093663.1-201ENST00000497190 394 ntBASIC5.98□□□□□ -1.45
CD44P16070 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.98□□□□□ -1.45
CD44P16070 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC5.98□□□□□ -1.45
CD44P16070 RPL23AP91-201ENST00000569211 455 ntBASIC5.98□□□□□ -1.45
CD44P16070 SNORD84-203ENST00000584275 78 ntBASIC5.98□□□□□ -1.45
CD44P16070 MIR548Z-201ENST00000584743 97 ntBASIC5.98□□□□□ -1.45
CD44P16070 AC091152.3-201ENST00000604227 325 ntBASIC5.98□□□□□ -1.45
CD44P16070 AC116447.1-201ENST00000613153 453 ntBASIC5.98□□□□□ -1.45
CD44P16070 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CD44P16070 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CD44P16070 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.98□□□□□ -1.45
CD44P16070 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CD44P16070 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms