Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 USP9YP8-201ENST00000441913 500 ntBASIC2.35□□□□□ -2.03
TOP1P11387 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.35□□□□□ -2.03
TOP1P11387 AC068781.1-201ENST00000488231 618 ntBASIC2.35□□□□□ -2.03
TOP1P11387 RPS15AP36-201ENST00000492022 382 ntBASIC2.35□□□□□ -2.03
TOP1P11387 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.35□□□□□ -2.03
TOP1P11387 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.35□□□□□ -2.03
TOP1P11387 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.35□□□□□ -2.03
TOP1P11387 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.35□□□□□ -2.03
TOP1P11387 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.35□□□□□ -2.03
TOP1P11387 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.35□□□□□ -2.03
TOP1P11387 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.35□□□□□ -2.03
TOP1P11387 AC012065.4-201ENST00000602445 679 ntBASIC2.35□□□□□ -2.03
TOP1P11387 AC027807.2-201ENST00000616099 408 ntBASIC2.35□□□□□ -2.03
TOP1P11387 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.35□□□□□ -2.03
TOP1P11387 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
TOP1P11387 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TOP1P11387 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.34□□□□□ -2.03
TOP1P11387 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.34□□□□□ -2.03
TOP1P11387 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TOP1P11387 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TOP1P11387 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TOP1P11387 SNORD116-9-201ENST00000384000 95 ntBASIC2.34□□□□□ -2.03
TOP1P11387 SNORD116-3-201ENST00000384287 95 ntBASIC2.34□□□□□ -2.03
TOP1P11387 SNORD116-7-201ENST00000384404 95 ntBASIC2.34□□□□□ -2.03
TOP1P11387 SNORD116-5-201ENST00000384462 95 ntBASIC2.34□□□□□ -2.03
TOP1P11387 RN7SKP158-201ENST00000410453 326 ntBASIC2.34□□□□□ -2.03
TOP1P11387 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.34□□□□□ -2.03
TOP1P11387 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.34□□□□□ -2.03
TOP1P11387 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.34□□□□□ -2.03
TOP1P11387 MTND1P30-201ENST00000441241 901 ntBASIC2.34□□□□□ -2.03
TOP1P11387 HMGN2P10-201ENST00000448085 265 ntBASIC2.34□□□□□ -2.03
TOP1P11387 CECR9-201ENST00000453421 199 ntBASIC2.34□□□□□ -2.03
TOP1P11387 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.34□□□□□ -2.03
TOP1P11387 MTCO1P42-201ENST00000457379 726 ntBASIC2.34□□□□□ -2.03
TOP1P11387 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.34□□□□□ -2.03
TOP1P11387 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.34□□□□□ -2.03
TOP1P11387 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.34□□□□□ -2.03
TOP1P11387 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.34□□□□□ -2.03
TOP1P11387 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.34□□□□□ -2.03
TOP1P11387 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.34□□□□□ -2.03
TOP1P11387 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.34□□□□□ -2.03
TOP1P11387 MIR5697-201ENST00000578045 78 ntBASIC2.34□□□□□ -2.03
TOP1P11387 AC002984.1-201ENST00000591692 448 ntBASIC2.34□□□□□ -2.03
TOP1P11387 AC005261.5-201ENST00000596280 355 ntBASIC2.34□□□□□ -2.03
TOP1P11387 AL355598.1-201ENST00000604169 202 ntBASIC2.34□□□□□ -2.03
TOP1P11387 AC009318.2-201ENST00000610917 651 ntBASIC2.34□□□□□ -2.03
TOP1P11387 DUSP12P1-201ENST00000612874 516 ntBASIC2.34□□□□□ -2.03
TOP1P11387 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.34□□□□□ -2.03
TOP1P11387 U4atac.1-201ENST00000618345 95 ntBASIC2.34□□□□□ -2.03
TOP1P11387 Z69908.1-201ENST00000622603 247 ntBASIC2.34□□□□□ -2.03
TOP1P11387 ELL2P3-201ENST00000457883 1602 ntBASIC2.34□□□□□ -2.04
TOP1P11387 AL359854.1-201ENST00000614203 1594 ntBASIC2.33□□□□□ -2.04
TOP1P11387 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.33□□□□□ -2.04
TOP1P11387 RNU6-486P-201ENST00000363116 107 ntBASIC2.33□□□□□ -2.04
TOP1P11387 U3.4-201ENST00000363352 213 ntBASIC2.33□□□□□ -2.04
TOP1P11387 U8.14-201ENST00000390843 143 ntBASIC2.33□□□□□ -2.04
TOP1P11387 RPS20P2-201ENST00000402520 389 ntBASIC2.33□□□□□ -2.04
TOP1P11387 MIR1289-2-201ENST00000408360 111 ntBASIC2.33□□□□□ -2.04
TOP1P11387 RNU2-68P-201ENST00000410878 191 ntBASIC2.33□□□□□ -2.04
TOP1P11387 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.33□□□□□ -2.04
TOP1P11387 HMGN2P38-201ENST00000423806 265 ntBASIC2.33□□□□□ -2.04
TOP1P11387 AC093106.2-201ENST00000428212 385 ntBASIC2.33□□□□□ -2.04
TOP1P11387 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.33□□□□□ -2.04
TOP1P11387 AC020550.1-201ENST00000447385 163 ntBASIC2.33□□□□□ -2.04
TOP1P11387 RPS27P21-201ENST00000486977 252 ntBASIC2.33□□□□□ -2.04
TOP1P11387 AC034222.1-201ENST00000494052 532 ntBASIC2.33□□□□□ -2.04
TOP1P11387 RNU6-1003P-201ENST00000517099 105 ntBASIC2.33□□□□□ -2.04
TOP1P11387 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TOP1P11387 AC118273.2-201ENST00000532092 465 ntBASIC2.33□□□□□ -2.04
TOP1P11387 MIR5089-201ENST00000580047 84 ntBASIC2.33□□□□□ -2.04
TOP1P11387 MIR548AB-201ENST00000584917 84 ntBASIC2.33□□□□□ -2.04
TOP1P11387 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.33□□□□□ -2.04
TOP1P11387 AC009314.1-201ENST00000603871 304 ntBASIC2.33□□□□□ -2.04
TOP1P11387 AL391813.2-201ENST00000609113 322 ntBASIC2.33□□□□□ -2.04
TOP1P11387 AL355472.4-201ENST00000610233 626 ntBASIC2.33□□□□□ -2.04
TOP1P11387 AC011939.3-201ENST00000613686 466 ntBASIC2.33□□□□□ -2.04
TOP1P11387 AC024581.2-201ENST00000619986 252 ntBASIC2.33□□□□□ -2.04
TOP1P11387 MTND4P4-201ENST00000439033 1366 ntBASIC2.33□□□□□ -2.04
TOP1P11387 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TOP1P11387 ADAM3A-203ENST00000461344 2157 ntBASIC2.32□□□□□ -2.04
TOP1P11387 OR56A5-201ENST00000340110 738 ntBASIC2.32□□□□□ -2.04
TOP1P11387 Y_RNA.46-201ENST00000362695 102 ntBASIC2.32□□□□□ -2.04
TOP1P11387 RNU4-52P-201ENST00000384209 138 ntBASIC2.32□□□□□ -2.04
TOP1P11387 RNU1-148P-201ENST00000384472 162 ntBASIC2.32□□□□□ -2.04
TOP1P11387 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
TOP1P11387 RNA5SP270-201ENST00000411361 118 ntBASIC2.32□□□□□ -2.04
TOP1P11387 AL359704.1-201ENST00000411586 781 ntBASIC2.32□□□□□ -2.04
TOP1P11387 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.32□□□□□ -2.04
TOP1P11387 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.32□□□□□ -2.04
TOP1P11387 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.32□□□□□ -2.04
TOP1P11387 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.32□□□□□ -2.04
TOP1P11387 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.32□□□□□ -2.04
TOP1P11387 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.32□□□□□ -2.04
TOP1P11387 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.32□□□□□ -2.04
TOP1P11387 AL031667.1-201ENST00000440222 725 ntBASIC2.32□□□□□ -2.04
TOP1P11387 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TOP1P11387 AP000797.1-201ENST00000478870 387 ntBASIC2.32□□□□□ -2.04
TOP1P11387 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.32□□□□□ -2.04
TOP1P11387 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.32□□□□□ -2.04
TOP1P11387 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms