Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.37□□□□□ -1.87
PF4V1P10720 AC105137.2-201ENST00000569073 466 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 MIR4795-201ENST00000584182 89 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.37□□□□□ -1.87
PF4V1P10720 AC078795.3-201ENST00000602913 472 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 AL354984.3-201ENST00000604803 325 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 AC098657.3-201ENST00000620434 263 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 AC007792.1-201ENST00000623023 402 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 SNORA50A-202ENST00000629536 136 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 AC002543.1-201ENST00000299783 1954 ntBASIC3.37□□□□□ -1.87
PF4V1P10720 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.37□□□□□ -1.87
PF4V1P10720 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PF4V1P10720 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PF4V1P10720 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PF4V1P10720 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PF4V1P10720 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.36□□□□□ -1.87
PF4V1P10720 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PF4V1P10720 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PF4V1P10720 RNA5SP388-201ENST00000362584 119 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 RNU6-1010P-201ENST00000362757 107 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 RNU1-140P-201ENST00000365040 165 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 RNU6-596P-201ENST00000365395 98 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 RNU6-692P-201ENST00000384496 107 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 RNU6-1222P-201ENST00000384615 107 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 AL078595.1-201ENST00000404458 226 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 RNU4-14P-201ENST00000410858 122 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 RNA5SP104-201ENST00000410989 118 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.36□□□□□ -1.87
PF4V1P10720 RPL23AP46-201ENST00000438548 490 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.36□□□□□ -1.87
PF4V1P10720 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.36□□□□□ -1.87
PF4V1P10720 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PF4V1P10720 RPS29P27-201ENST00000463711 170 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 RPL22P13-201ENST00000493291 347 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.36□□□□□ -1.87
PF4V1P10720 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.36□□□□□ -1.87
PF4V1P10720 AC026782.1-201ENST00000512952 449 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.36□□□□□ -1.87
PF4V1P10720 SCARNA17.1-201ENST00000516211 143 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 SNORA31.6-201ENST00000516241 130 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 SCARNA17.2-201ENST00000516334 143 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 Y_RNA.708-201ENST00000516950 96 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PF4V1P10720 HPRT1P3-201ENST00000539521 576 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.36□□□□□ -1.87
PF4V1P10720 GLYCAM1-201ENST00000546596 285 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 AC093027.1-201ENST00000546698 429 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.36□□□□□ -1.87
PF4V1P10720 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.36□□□□□ -1.87
PF4V1P10720 RPL23AP97-201ENST00000568955 471 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 SCARNA17.4-201ENST00000614296 143 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 MIR8059-201ENST00000620427 81 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 FP236240.3-201ENST00000623061 327 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 AC112484.5-201ENST00000624189 228 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PF4V1P10720 AL359854.1-201ENST00000614203 1594 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 ZNF962P-201ENST00000443465 3140 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 TNPO1P3-201ENST00000436471 2662 ntBASIC3.36□□□□□ -1.87
PF4V1P10720 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.36□□□□□ -1.87
PF4V1P10720 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PF4V1P10720 SNORD114-19-201ENST00000363072 75 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 U8.8-201ENST00000365399 135 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 Y_RNA.509-201ENST00000384506 99 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 MIR544A-201ENST00000384855 91 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 MIR521-1-201ENST00000384902 87 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 RNA5SP317-201ENST00000410176 116 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 RNU6-370P-201ENST00000411008 104 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 RNA5SP311-201ENST00000411290 116 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 AC138623.1-201ENST00000418060 216 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.35□□□□□ -1.87
PF4V1P10720 AC006946.1-201ENST00000429106 328 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 MTND3P9-201ENST00000429526 346 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.35□□□□□ -1.87
PF4V1P10720 AC236972.2-201ENST00000434979 310 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.35□□□□□ -1.87
PF4V1P10720 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.35□□□□□ -1.87
PF4V1P10720 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
PF4V1P10720 RPS29P19-201ENST00000479709 171 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 AC008958.1-201ENST00000511047 682 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 RNA5SP315-201ENST00000516340 116 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 RNA5SP519-201ENST00000516480 119 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 RNA5SP312-201ENST00000517068 116 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.35□□□□□ -1.87
PF4V1P10720 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.35□□□□□ -1.87
PF4V1P10720 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.35□□□□□ -1.87
PF4V1P10720 FRG2DP-202ENST00000566967 323 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.35□□□□□ -1.87
PF4V1P10720 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.35□□□□□ -1.87
PF4V1P10720 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.35□□□□□ -1.87
PF4V1P10720 MIR3976-201ENST00000606807 139 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 AC092628.2-201ENST00000622492 339 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 AL359757.2-201ENST00000624309 274 ntBASIC3.35□□□□□ -1.87
PF4V1P10720 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PF4V1P10720 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PF4V1P10720 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.35□□□□□ -1.87
PF4V1P10720 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PF4V1P10720 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PF4V1P10720 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PF4V1P10720 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms