Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC108751.2-201ENST00000469993 231 ntBASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 RPL29P14-201ENST00000495837 428 ntBASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 AC113155.1-201ENST00000511141 769 ntBASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 AC107393.1-201ENST00000512403 346 ntBASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 RNU1-86P-201ENST00000516108 154 ntBASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 RNU1-107P-201ENST00000516617 154 ntBASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 TRAV37-201ENST00000553906 342 ntBASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 AC025627.2-201ENST00000576220 160 ntBASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 OR1M4P-201ENST00000589199 287 ntBASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 AC009093.8-201ENST00000641769 292 ntBASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 EOGT-210ENST00000615922 1931 ntBASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 RNU6-378P-201ENST00000384324 107 ntBASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 Y_RNA.533-201ENST00000384596 114 ntBASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 AC096920.1-201ENST00000423991 241 ntBASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 AC092423.1-201ENST00000430165 186 ntBASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 AP000873.1-201ENST00000463987 400 ntBASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 HMGN2P13-201ENST00000476476 274 ntBASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 SNORA31.6-201ENST00000516241 130 ntBASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 MIR892C-201ENST00000516410 77 ntBASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 Y_RNA.683-201ENST00000516508 93 ntBASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 MIR3976-201ENST00000606807 139 ntBASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 AC019176.2-201ENST00000611579 315 ntBASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 AL391261.4-201ENST00000616012 481 ntBASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 RMST_4.1-201ENST00000616886 107 ntBASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 AC091953.5-201ENST00000622919 233 ntBASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 AL034408.1-202ENST00000636088 415 ntBASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.42□□□□□ -1.54
CSB-PGBD3P0DP91 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 NOL8P1-201ENST00000508336 3529 ntBASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 RNU6-1266P-201ENST00000362794 105 ntBASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 RNU6-741P-201ENST00000383889 107 ntBASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 MIR628-201ENST00000385229 95 ntBASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 MIR607-201ENST00000385241 96 ntBASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 RNU6-325P-201ENST00000411132 105 ntBASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 RPS15AP6-201ENST00000420703 385 ntBASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 PIGFP3-201ENST00000441918 722 ntBASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 ACA59.1-201ENST00000515966 143 ntBASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 RNA5SP291-201ENST00000517222 105 ntBASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 CBX3P4-201ENST00000538909 354 ntBASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 CYCSP30-201ENST00000546447 172 ntBASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 AMZ2P1-203ENST00000565833 850 ntBASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 BX284668.6-201ENST00000606899 438 ntBASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 AC027290.2-201ENST00000623210 18662 ntBASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 AL161912.2-201ENST00000565707 3007 ntBASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.41□□□□□ -1.54
CSB-PGBD3P0DP91 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 AC008568.2-201ENST00000623862 2313 ntBASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 Y_RNA.16-201ENST00000362421 102 ntBASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 RNU6-600P-201ENST00000362524 99 ntBASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 Y_RNA.83-201ENST00000363005 113 ntBASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 SNORD35B-201ENST00000363660 87 ntBASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 EIF1P2-201ENST00000428233 350 ntBASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 RNA5SP103-201ENST00000459503 118 ntBASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 AC110768.1-201ENST00000509222 400 ntBASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 RNU1-95P-201ENST00000516357 160 ntBASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 RNU6-911P-201ENST00000516523 104 ntBASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 RNU1-128P-201ENST00000516704 160 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms