Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC007151.1-201ENST00000572774 483 ntBASIC2.7□□□□□ -1.98
RAB40ALP0C0E4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.7□□□□□ -1.98
RAB40ALP0C0E4 MIR4298-201ENST00000584380 73 ntBASIC2.7□□□□□ -1.98
RAB40ALP0C0E4 AC005261.5-201ENST00000596280 355 ntBASIC2.7□□□□□ -1.98
RAB40ALP0C0E4 AC069234.5-201ENST00000611056 416 ntBASIC2.7□□□□□ -1.98
RAB40ALP0C0E4 MIR6134-201ENST00000617606 109 ntBASIC2.7□□□□□ -1.98
RAB40ALP0C0E4 AC139792.2-201ENST00000624218 587 ntBASIC2.7□□□□□ -1.98
RAB40ALP0C0E4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
RAB40ALP0C0E4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RAB40ALP0C0E4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 AC093536.2-201ENST00000565257 1406 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 RNU6-371P-201ENST00000364283 108 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 Y_RNA.381-201ENST00000365666 102 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 RNU2-29P-201ENST00000410423 189 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 NUP35P1-201ENST00000422734 947 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 SAR1AP4-201ENST00000429225 591 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 AC104332.2-201ENST00000429959 156 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 AL118520.1-201ENST00000450770 291 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 RPL23AP11-201ENST00000475260 469 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 AC091435.1-201ENST00000505442 584 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 Y_RNA.655-201ENST00000515919 96 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 RNU6-581P-201ENST00000516214 105 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 AP003034.1-201ENST00000534621 422 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 MIR4319-201ENST00000577285 85 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 MTATP6P3-201ENST00000581686 676 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 AL645944.1-201ENST00000603857 493 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 AC087241.4-201ENST00000612441 480 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 AC124864.2-201ENST00000624736 186 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 AC068137.4-201ENST00000638485 296 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 AC004944.1-201ENST00000517807 3059 ntBASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
RAB40ALP0C0E4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 CDC27P3-201ENST00000635418 1910 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 AC062016.1-201ENST00000355719 319 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 RNU6-1280P-201ENST00000365211 107 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 RNU6-996P-201ENST00000365438 107 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 Y_RNA.409-201ENST00000383990 98 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 RNU6-517P-201ENST00000384362 110 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 MIR10A-201ENST00000385043 110 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 MTCO3P40-201ENST00000392516 676 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 MTCYBP8-201ENST00000422855 651 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 AL627311.1-201ENST00000431514 115 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 OSTCP8-201ENST00000445117 448 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 SRRM1P2-201ENST00000464531 1192 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 GMFBP1-201ENST00000467831 427 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 HMGB1P30-201ENST00000492455 606 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 RNU6-1178P-201ENST00000516674 107 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 RN7SKP219-201ENST00000516825 296 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 AP001893.2-201ENST00000526949 202 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 GLYCAM1-201ENST00000546596 285 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 AC234778.2-201ENST00000566241 354 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 AC017083.3-201ENST00000609955 700 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 AL354950.2-201ENST00000617939 290 ntBASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.68□□□□□ -1.98
RAB40ALP0C0E4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RAB40ALP0C0E4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.67□□□□□ -1.98
RAB40ALP0C0E4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RAB40ALP0C0E4 Y_RNA.41-201ENST00000362646 102 ntBASIC2.67□□□□□ -1.98
RAB40ALP0C0E4 RNU6-552P-201ENST00000362869 119 ntBASIC2.67□□□□□ -1.98
RAB40ALP0C0E4 SNORD14B-201ENST00000364533 90 ntBASIC2.67□□□□□ -1.98
RAB40ALP0C0E4 RNU6-715P-201ENST00000365204 103 ntBASIC2.67□□□□□ -1.98
RAB40ALP0C0E4 MIR34A-201ENST00000385130 110 ntBASIC2.67□□□□□ -1.98
RAB40ALP0C0E4 MIR9-1-201ENST00000385198 89 ntBASIC2.67□□□□□ -1.98
RAB40ALP0C0E4 RNU6-1158P-201ENST00000391167 107 ntBASIC2.67□□□□□ -1.98
RAB40ALP0C0E4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RAB40ALP0C0E4 MIR887-201ENST00000401258 79 ntBASIC2.67□□□□□ -1.98
RAB40ALP0C0E4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.67□□□□□ -1.98
RAB40ALP0C0E4 AL513477.1-202ENST00000417061 214 ntBASIC2.67□□□□□ -1.98
RAB40ALP0C0E4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms