Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FABP5P13-201ENST00000452144 328 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXC6P09630 HMGN1P13-201ENST00000505795 138 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 FAM206BP-201ENST00000510179 541 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.24□□□□□ -1.89
HOXC6P09630 RN7SKP256-201ENST00000517201 314 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXC6P09630 AC100870.1-201ENST00000522035 505 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 MTND4P7-201ENST00000523876 130 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.24□□□□□ -1.89
HOXC6P09630 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXC6P09630 AC005668.1-201ENST00000571142 476 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 AC008521.1-201ENST00000587471 187 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 AC005498.1-201ENST00000592125 465 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 DPPA3P3-201ENST00000603842 430 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 AL158032.1-201ENST00000605401 106 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 uc_338.5-201ENST00000611839 155 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 AC104237.2-201ENST00000612456 443 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 AL390240.1-201ENST00000612950 384 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 AC090574.1-201ENST00000623186 233 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 FRG1KP-201ENST00000623592 341 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HOXC6P09630 MTND4P23-201ENST00000447723 1363 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HOXC6P09630 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXC6P09630 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.23□□□□□ -1.89
HOXC6P09630 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXC6P09630 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXC6P09630 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXC6P09630 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXC6P09630 RNA5SP295-201ENST00000362655 121 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 Y_RNA.167-201ENST00000363735 109 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXC6P09630 Y_RNA.474-201ENST00000384341 102 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 RNU6-550P-201ENST00000391057 101 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXC6P09630 EI24P2-201ENST00000397776 1076 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXC6P09630 RNU2-43P-201ENST00000410306 190 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 OR6C66P-201ENST00000414917 930 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 AC092809.3-201ENST00000415453 231 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXC6P09630 AL451054.2-201ENST00000420896 202 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 PPP1R11P2-201ENST00000423543 382 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 AC125238.1-201ENST00000448842 249 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 RNU6-123P-201ENST00000516163 102 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 RNU6-273P-201ENST00000516937 96 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 SNORA31.22-201ENST00000517204 135 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXC6P09630 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.23□□□□□ -1.89
HOXC6P09630 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXC6P09630 MIR3942-201ENST00000585264 109 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXC6P09630 AL022099.1-201ENST00000604551 712 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 AC008162.1-201ENST00000604718 254 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 AL670379.4-201ENST00000605279 254 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 AL133255.1-201ENST00000606374 441 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 AC092807.2-201ENST00000609367 243 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 MIR6715A-201ENST00000615929 79 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 MIR6130-201ENST00000619419 109 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.23□□□□□ -1.89
HOXC6P09630 MTND1P37-201ENST00000636562 264 ntBASIC3.23□□□□□ -1.89
HOXC6P09630 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXC6P09630 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXC6P09630 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.23□□□□□ -1.89
HOXC6P09630 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HOXC6P09630 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXC6P09630 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXC6P09630 RNU6-859P-201ENST00000362728 107 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 SNORA51.2-201ENST00000364595 132 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 Y_RNA.460-201ENST00000384255 102 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 MIR196B-201ENST00000384852 84 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 AL138827.1-201ENST00000402666 306 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 RNA5SP21-201ENST00000410917 96 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 AL592148.1-201ENST00000413568 445 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXC6P09630 HSPE1P1-201ENST00000421494 318 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXC6P09630 EEF1B2P7-201ENST00000451177 676 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXC6P09630 RPL23AP14-201ENST00000468281 468 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 AC128713.1-201ENST00000471495 306 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 RPL21P93-201ENST00000480465 489 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 RN7SL633P-201ENST00000488974 297 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 RPL23AP55-201ENST00000498163 452 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 AC091885.1-201ENST00000506658 268 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 AP001804.3-201ENST00000525146 880 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 AP006587.4-201ENST00000526053 529 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 AC093012.1-202ENST00000549403 582 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXC6P09630 AC005951.2-201ENST00000576282 495 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.22□□□□□ -1.89
HOXC6P09630 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.22□□□□□ -1.89
HOXC6P09630 AP001486.3-201ENST00000615334 372 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 AL353748.2-201ENST00000622148 471 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HOXC6P09630 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HOXC6P09630 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms